Basic Information:

  VIRBase ID:  

VHID00178215

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          DDX51:  NM_175066     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	DDX51
miRBase Accession/Entrez ID	MIMAT0014697	317781
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DDX51	chr12:132621397(-) A-I      3'UTR chr12:132623301(-) A-I      3'UTR chr12:132621332(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DDX51	chr12:132621516-132621517(-) m6A 3'UTR       27773535 chr12:132621558-132621559(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:132621563-132621564(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:132621581-132621582(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:132621618-132621619(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr12:132621634-132621635(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr12:132621667-132621668(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr12:132621675-132621676(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr12:132621717-132621718(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr12:132621772-132621773(-) m6A 3'UTR       24981863//27773535//27371828 chr12:132621779-132621780(-) m6A 3'UTR       24981863//27773535//27371828 chr12:132621810-132621811(-) m6A 3'UTR       24981863//27773535//27371828 chr12:132621858-132621859(-) m6A 3'UTR       27773535//27371828 chr12:132621877-132621878(-) m6A 3'UTR       27773535//27371828 chr12:132622047-132622048(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr12:132622062-132622063(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr12:132622073-132622074(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr12:132622081-132622082(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr12:132622112-132622113(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr12:132622148-132622149(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085 chr12:132622174-132622175(-) m6A 3'UTR//exon       24284625//24981863//27371828 chr12:132622415-132622416(-) m6A 3'UTR//exon       24981863 chr12:132622520-132622521(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr12:132622527-132622528(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr12:132622627-132622628(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828 chr12:132622634-132622635(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828 chr12:132622695-132622696(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085 chr12:132622760-132622761(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr12:132622788-132622789(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr12:132622825-132622826(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr12:132622845-132622846(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr12:132622884-132622885(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr12:132622922-132622923(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr12:132622953-132622954(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr12:132623027-132623028(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr12:132623064-132623065(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr12:132623087-132623088(-) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr12:132623190-132623191(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085 chr12:132623260-132623261(-) m6A 3'UTR//exon       24981863 chr12:132623355-132623356(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr12:132623378-132623379(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr12:132623626-132623627(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:132623707-132623708(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr12:132623791-132623792(-) m6A 3'UTR//exon       24284625//24209618//25456834//27371828//27773536//22575960//22608085 chr12:132624435-132624436(-) m6A CDS//exon       27371828 chr12:132624440-132624441(-) m6A CDS//exon       27371828 chr12:132624458-132624459(-) m6A CDS//exon       27371828 chr12:132624655-132624656(-) m6A CDS//exon       24284625 chr12:132624681-132624682(-) m6A CDS//exon       24284625 chr12:132624984-132624985(-) m6A CDS//exon       24284625 chr12:132625173-132625174(-) m6A CDS//exon       24284625 chr12:132625505-132625506(-) m6A CDS//exon       24284625//27773536 chr12:132625708-132625709(-) m6A exon//intron       24284625 chr12:132625870-132625871(-) m6A CDS//exon       24284625 chr12:132625879-132625880(-) m6A CDS//exon       24284625 chr12:132626077-132626078(-) m6A CDS//exon       24284625 chr12:132626091-132626092(-) m6A CDS//exon       24284625 chr12:132628293-132628294(-) m6A CDS       24209618//25456834//27371828//27773536 chr12:132628317-132628318(-) m6A CDS       24209618//25456834//27371828//27773536 chr12:132628681-132628682(-) m6A CDS       24209618//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DDX51	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: DDX51

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg