Detail Information

Basic Information:


  VIRBase ID:  

VHID00178212

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:           SEC14L4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H11-5p SEC14L4
miRBase
Accession/Entrez ID		 MIMAT0014697 284904
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - TAP3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SEC14L4
chr22:30901010(-) A-I      intronic
chr22:30885536(-) A-I      3'UTR
chr22:30901080(-) A-I      intronic
chr22:30895978(-) A-I      intronic
chr22:30901019(-) A-I      intronic
chr22:30900333(-) A-I      intronic
chr22:30900306(-) A-I      intronic
chr22:30900107(-) A-I      intronic
chr22:30896992(-) A-I      intronic
chr22:30885430(-) A-I      3'UTR
chr22:30885402(-) A-I      3'UTR
chr22:30885400(-) A-I      3'UTR
chr22:30885395(-) A-I      3'UTR
chr22:30885494(-) A-I      3'UTR
chr22:30885451(-) A-I      3'UTR
chr22:30898676(-) A-I      intronic
chr22:30896492(-) A-I      intronic
chr22:30893429(-) A-I      intronic
chr22:30900859(-) A-I      intronic
chr22:30894215(-) A-I      intronic
chr22:30895911(-) A-I      intronic
chr22:30896573(-) A-I      intronic
chr22:30885469(-) A-I      3'UTR
chr22:30885365(-) A-I      3'UTR
chr22:30885428(-) A-I      3'UTR
chr22:30885404(-) A-I      3'UTR
chr22:30885405(-) A-I      3'UTR
chr22:30885355(-) A-I      3'UTR
chr22:30885500(-) A-I      3'UTR
chr22:30885383(-) A-I      3'UTR
chr22:30885477(-) A-I      3'UTR
chr22:30885508(-) A-I      3'UTR
chr22:30885351(-) A-I      3'UTR
chr22:30885279(-) A-I      3'UTR
chr22:30885319(-) A-I      3'UTR
chr22:30885406(-) A-I      3'UTR
chr22:30885294(-) A-I      3'UTR
chr22:30885303(-) A-I      3'UTR
chr22:30885502(-) A-I      3'UTR
chr22:30885342(-) A-I      3'UTR
chr22:30885499(-) A-I      3'UTR
chr22:30885299(-) A-I      3'UTR
chr22:30885338(-) A-I      3'UTR
chr22:30896051(-) A-I      intronic
chr22:30900173(-) A-I      intronic
chr22:30900293(-) A-I      intronic
chr22:30896626(-) A-I      intronic
chr22:30898580(-) A-I      intronic
chr22:30896625(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SEC14L4
chr22:30884974(-) A-I exon 3'UTR    15342557
chr22:30885279(-) A-I exon 3'UTR    15342557
chr22:30885294(-) A-I exon 3'UTR    15342557
chr22:30885299(-) A-I exon 3'UTR    15342557
chr22:30885303(-) A-I exon 3'UTR    15342557
chr22:30885319(-) A-I exon 3'UTR    15342557
chr22:30885332(-) A-I exon 3'UTR    15342557
chr22:30885338(-) A-I exon 3'UTR    15342557
chr22:30885342(-) A-I exon 3'UTR    15342557
chr22:30885351(-) A-I exon 3'UTR    15342557
chr22:30885355(-) A-I exon 3'UTR    15342557
chr22:30885364(-) A-I exon 3'UTR    15342557
chr22:30885365(-) A-I exon 3'UTR    15342557
chr22:30885383(-) A-I exon 3'UTR    15342557
chr22:30885403(-) A-I exon 3'UTR    15342557
chr22:30885404(-) A-I exon 3'UTR    15342557
chr22:30885405(-) A-I exon 3'UTR    15342557
chr22:30885406(-) A-I exon 3'UTR    15342557
chr22:30885409(-) A-I exon 3'UTR    15342557
chr22:30885420(-) A-I exon 3'UTR    15342557
chr22:30885428(-) A-I exon 3'UTR    15342557
chr22:30885454(-) A-I exon 3'UTR    15342557
chr22:30885464(-) A-I exon 3'UTR    15342557
chr22:30885469(-) A-I exon 3'UTR    15342557
chr22:30885477(-) A-I exon 3'UTR    15342557
chr22:30885499(-) A-I exon 3'UTR    15342557
chr22:30885500(-) A-I exon 3'UTR    15342557
chr22:30885502(-) A-I exon 3'UTR    15342557
chr22:30885508(-) A-I exon 3'UTR    15342557
chr22:30885551(-) A-I exon 3'UTR    15342557
chr22:30885601(-) A-I exon 3'UTR    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SEC14L4
chr22:30885198-30885199(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885205-30885206(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885224-30885225(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885232-30885233(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885240-30885241(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885253-30885254(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885419-30885420(-) m6A 3'UTR       25456834//24981863
chr22:30885442-30885443(-) m6A 3'UTR       25456834//24981863
chr22:30885524-30885525(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885696-30885697(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30885755-30885756(-) m6A 3'UTR       24284625//25456834//24981863
chr22:30901578-30901579(-) m6A CDS       24981863
chr22:30901633-30901634(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SEC14L4
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H11-5p
Interactor2: SEC14L4

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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