Basic Information:

  VIRBase ID:  

VHID00178209

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          CAVIN1:  NM_012232     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	CAVIN1
miRBase Accession/Entrez ID	MIMAT0014697	284119
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CAVIN//cavin-1//CGL4//FKSG13//PTRF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CAVIN1	chr17:40555815(-) A-I      3'UTR chr17:40555814(-) A-I      3'UTR chr17:40555813(-) A-I      3'UTR chr17:40555841(-) A-I      3'UTR chr17:40555840(-) A-I      3'UTR chr17:40555784(-) A-I      3'UTR chr17:40555838(-) A-I      3'UTR chr17:40555823(-) A-I      3'UTR chr17:40555819(-) A-I      3'UTR chr17:40555767(-) A-I      3'UTR chr17:40567613(-) A-I      intronic chr17:40555783(-) A-I      3'UTR chr17:40555822(-) A-I      3'UTR chr17:40555825(-) A-I      3'UTR chr17:40555774(-) A-I      3'UTR chr17:40555824(-) A-I      3'UTR chr17:40555761(-) A-I      3'UTR chr17:40555751(-) A-I      3'UTR chr17:40555810(-) A-I      3'UTR chr17:40555742(-) A-I      3'UTR chr17:40571469(-) A-I      intronic chr17:40571414(-) A-I      intronic chr17:40555802(-) A-I      3'UTR chr17:40571459(-) A-I      intronic chr17:40555778(-) A-I      3'UTR chr17:40569227(-) A-I      intronic chr17:40568554(-) A-I      intronic chr17:40568334(-) A-I      intronic chr17:40568317(-) A-I      intronic chr17:40566546(-) A-I      intronic chr17:40565183(-) A-I      intronic chr17:40566027(-) A-I      intronic chr17:40566120(-) A-I      intronic chr17:40557937(-) A-I      intronic chr17:40557955(-) A-I      intronic chr17:40570947(-) A-I      intronic chr17:40557977(-) A-I      intronic chr17:40563314(-) A-I      intronic chr17:40566507(-) A-I      intronic chr17:40566548(-) A-I      intronic chr17:40564733(-) A-I      intronic chr17:40566122(-) A-I      intronic chr17:40566048(-) A-I      intronic chr17:40569251(-) A-I      intronic chr17:40563341(-) A-I      intronic chr17:40569788(-) A-I      intronic chr17:40571427(-) A-I      intronic chr17:40571439(-) A-I      intronic chr17:40566552(-) A-I      intronic chr17:40564787(-) A-I      intronic chr17:40569254(-) A-I      intronic chr17:40571007(-) A-I      intronic chr17:40571208(-) A-I      intronic chr17:40571468(-) A-I      intronic chr17:40571146(-) A-I      intronic chr17:40570521(-) A-I      intronic chr17:40567607(-) A-I      intronic chr17:40569446(-) A-I      intronic chr17:40565494(-) A-I      intronic chr17:40565379(-) A-I      intronic chr17:40558627(-) A-I      intronic chr17:40565114(-) A-I      intronic chr17:40570967(-) A-I      intronic chr17:40568486(-) A-I      intronic chr17:40565546(-) A-I      intronic chr17:40569896(-) A-I      intronic chr17:40555653(-) A-I      3'UTR chr17:40569792(-) A-I      intronic chr17:40571132(-) A-I      intronic chr17:40555891(-) A-I      3'UTR chr17:40565042(-) A-I      intronic chr17:40565087(-) A-I      intronic chr17:40567465(-) A-I      intronic chr17:40557573(-) A-I      intronic chr17:40566053(-) A-I      intronic chr17:40571099(-) A-I      intronic chr17:40569221(-) A-I      intronic chr17:40571588(-) A-I      intronic chr17:40558668(-) A-I      intronic chr17:40561318(-) A-I      intronic chr17:40568540(-) A-I      intronic chr17:40571601(-) A-I      intronic chr17:40571103(-) A-I      intronic chr17:40571128(-) A-I      intronic chr17:40565358(-) A-I      intronic chr17:40563353(-) A-I      intronic chr17:40564509(-) A-I      intronic chr17:40571475(-) A-I      intronic chr17:40562981(-) A-I      intronic chr17:40569898(-) A-I      intronic chr17:40569352(-) A-I      intronic chr17:40555750(-) A-I      3'UTR

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CAVIN1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells     - Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: CAVIN1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg