Basic Information:

  VIRBase ID:  

VHID00178202

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          RNF152:  NM_173557     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	RNF152
miRBase Accession/Entrez ID	MIMAT0014697	220441
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RNF152	chr18:59554381(-) A-I      intronic chr18:59551953(-) A-I      intronic chr18:59551931(-) A-I      intronic chr18:59548176(-) A-I      intronic chr18:59551889(-) A-I      intronic chr18:59551921(-) A-I      intronic chr18:59551930(-) A-I      intronic chr18:59477781(-) A-I      3'UTR chr18:59477753(-) A-I      3'UTR chr18:59548311(-) A-I      intronic chr18:59535756(-) A-I      intronic chr18:59554695(-) A-I      intronic chr18:59547159(-) A-I      intronic chr18:59477874(-) A-I      3'UTR chr18:59517063(-) A-I      intronic chr18:59548316(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF152	chr18:59476269-59476270(-) m6A 3'UTR       24981863 chr18:59476278-59476279(-) m6A 3'UTR       24981863 chr18:59476302-59476303(-) m6A 3'UTR       24981863 chr18:59476335-59476336(-) m6A 3'UTR       24981863 chr18:59476340-59476341(-) m6A 3'UTR       24981863 chr18:59476400-59476401(-) m6A 3'UTR       24981863 chr18:59476472-59476473(-) m6A 3'UTR       24981863 chr18:59482355-59482356(-) m6A 3'UTR       24981863//27773535 chr18:59482393-59482394(-) m6A 3'UTR       24981863//27773535//22608085 chr18:59482420-59482421(-) m6A 3'UTR       24981863//27773535//22608085 chr18:59482468-59482469(-) m6A 3'UTR       24981863//27773535//22608085 chr18:59482502-59482503(-) m6A 3'UTR       24981863//27773535//22608085 chr18:59482532-59482533(-) m6A 3'UTR       24981863//22608085 chr18:59482551-59482552(-) m6A 3'UTR       24981863//22608085 chr18:59482605-59482606(-) m6A 3'UTR       24981863//22608085 chr18:59482649-59482650(-) m6A 3'UTR       24981863//22608085 chr18:59482680-59482681(-) m6A 3'UTR       24981863//22608085 chr18:59482694-59482695(-) m6A 3'UTR       24981863//22608085 chr18:59482711-59482712(-) m6A 3'UTR       24981863//22608085 chr18:59482760-59482761(-) m6A 3'UTR       24981863//22608085 chr18:59482782-59482783(-) m6A 3'UTR       24981863//22608085 chr18:59482822-59482823(-) m6A 3'UTR       24981863//22608085 chr18:59482940-59482941(-) m6A 3'UTR       24209618//24981863//22608085 chr18:59483229-59483230(-) m6A CDS       25456834 chr18:59483282-59483283(-) m6A CDS       25456834 chr18:59483438-59483439(-) m6A CDS       25456834 chr18:59483566-59483567(-) m6A CDS       25456834//24981863//22608085 chr18:59483610-59483611(-) m6A CDS       25456834//24981863//22575960//22608085 chr18:59483676-59483677(-) m6A CDS       25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNF152	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: RNF152

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg