Detail Information

Basic Information:


  VIRBase ID:  

VHID00178198

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:           ANKRD23:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H11-5p ANKRD23
miRBase
Accession/Entrez ID		 MIMAT0014697 200539
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - DARP//MARP3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ANKRD23
chr2:97492071(-) A-I      intronic
chr2:97492054(-) A-I      intronic
chr2:97491581(-) A-I      intronic
chr2:97491538(-) A-I      intronic
chr2:97491529(-) A-I      intronic
chr2:97491526(-) A-I      intronic
chr2:97491489(-) A-I      intronic
chr2:97493201(-) A-I      intronic
chr2:97493172(-) A-I      intronic
chr2:97493169(-) A-I      intronic
chr2:97493142(-) A-I      intronic
chr2:97493133(-) A-I      intronic
chr2:97493110(-) A-I      intronic
chr2:97493107(-) A-I      intronic
chr2:97492201(-) A-I      intronic
chr2:97492175(-) A-I      intronic
chr2:97492159(-) A-I      intronic
chr2:97492074(-) A-I      intronic
chr2:97492038(-) A-I      intronic
chr2:97492026(-) A-I      intronic
chr2:97491586(-) A-I      intronic
chr2:97491575(-) A-I      intronic
chr2:97491521(-) A-I      intronic
chr2:97491514(-) A-I      intronic
chr2:97491510(-) A-I      intronic
chr2:97491490(-) A-I      intronic
chr2:97491472(-) A-I      intronic
chr2:97491464(-) A-I      intronic
chr2:97491455(-) A-I      intronic
chr2:97491453(-) A-I      intronic
chr2:97491433(-) A-I      intronic
chr2:97491397(-) A-I      intronic
chr2:97491395(-) A-I      intronic
chr2:97496441(-) A-I      intronic
chr2:97493300(-) A-I      intronic
chr2:97493271(-) A-I      intronic
chr2:97493187(-) A-I      intronic
chr2:97493184(-) A-I      intronic
chr2:97492224(-) A-I      intronic
chr2:97492194(-) A-I      intronic
chr2:97492088(-) A-I      intronic
chr2:97491383(-) A-I      intronic
chr2:97492098(-) A-I      intronic
chr2:97492230(-) A-I      intronic
chr2:97492023(-) A-I      intronic
chr2:97507187(-) A-I      intronic
chr2:97491562(-) A-I      intronic
chr2:97501848(-) A-I      intronic
chr2:97492178(-) A-I      intronic
chr2:97492150(-) A-I      intronic
chr2:97492170(-) A-I      intronic
chr2:97491551(-) A-I      intronic
chr2:97491458(-) A-I      intronic
chr2:97501827(-) A-I      intronic
chr2:97492210(-) A-I      intronic
chr2:97492047(-) A-I      intronic
chr2:97491446(-) A-I      intronic
chr2:97492246(-) A-I      intronic
chr2:97493232(-) A-I      intronic
chr2:97492052(-) A-I      intronic
chr2:97491516(-) A-I      intronic
chr2:97491555(-) A-I      intronic
chr2:97491396(-) A-I      intronic
chr2:97501826(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ANKRD23
chr2:97490390-97490391(-) m6A exon       24284625//25456834//24981863
chr2:97490454-97490455(-) m6A exon       24284625//25456834//27773535//27371828
chr2:97490480-97490481(-) m6A exon       24284625//25456834//27773535
chr2:97502684-97502685(-) m6A intron       27773535
chr2:97502718-97502719(-) m6A intron       27773535
chr2:97502775-97502776(-) m6A intron       27773535
chr2:97502780-97502781(-) m6A intron       27773535
chr2:97502815-97502816(-) m6A intron       27773535
chr2:97502845-97502846(-) m6A intron       27773535
chr2:97503079-97503080(-) m6A intron       27773535
chr2:97503129-97503130(-) m6A intron       27773535
chr2:97503211-97503212(-) m6A intron       27773535
chr2:97503219-97503220(-) m6A intron       27773535
chr2:97503389-97503390(-) m6A intron       27773535
chr2:97504261-97504262(-) m6A 3'UTR//intron       27371828
chr2:97504560-97504561(-) m6A 3'UTR//exon//intron       25456834//27371828
chr2:97504589-97504590(-) m6A 3'UTR//exon//intron       25456834
chr2:97505044-97505045(-) m6A 3'UTR//exon//intron       27371828//27773536
chr2:97505141-97505142(-) m6A 3'UTR//exon//intron       27371828//27773536
chr2:97505349-97505350(-) m6A CDS//exon//intron       25456834//27371828//27773536
chr2:97505404-97505405(-) m6A intron       25456834//24981863//27371828//27773536
chr2:97505554-97505555(-) m6A CDS//exon//intron       25456834//27371828//27773536
chr2:97505660-97505661(-) m6A intron       27371828//27773536
chr2:97505680-97505681(-) m6A intron       27371828//27773536
chr2:97505700-97505701(-) m6A intron       27371828//27773536
chr2:97505972-97505973(-) m6A CDS//exon       27773536
chr2:97506010-97506011(-) m6A CDS//exon       27773536
chr2:97506028-97506029(-) m6A CDS//exon       27773536
chr2:97506057-97506058(-) m6A CDS//exon       27773536
chr2:97506062-97506063(-) m6A CDS//exon       27773536
chr2:97506156-97506157(-) m6A CDS//exon       27773536
chr2:97506195-97506196(-) m6A CDS//exon       27773536
chr2:97507835-97507836(-) m6A CDS//exon       27773535
chr2:97507866-97507867(-) m6A CDS//exon       27773535
chr2:97508206-97508207(-) m6A CDS//exon       27773535//27371828
chr2:97513728-97513729(-) m6A intron       27773535
chr2:97513819-97513820(-) m6A intron       24209618//24981863//27773535//22608085
chr2:97513853-97513854(-) m6A intron       24284625//24209618//25456834//24981863//27773535//22608085
chr2:97513858-97513859(-) m6A intron       24284625//24209618//25456834//24981863//27773535//22608085
chr2:97513933-97513934(-) m6A intron       24284625//25456834//24981863//27773535//27773536//22608085
chr2:97513944-97513945(-) m6A intron       24284625//25456834//24981863//27773535//27773536//22608085
chr2:97513996-97513997(-) m6A intron       24284625//27773535//27773536
chr2:97514107-97514108(-) m6A exon       24284625//27773536
chr2:97514158-97514159(-) m6A exon       24284625//27773535//27773536
chr2:97520150-97520151(-) m6A intron       27773536
chr2:97523635-97523636(-) m6A exon       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ANKRD23
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H11-5p
Interactor2: ANKRD23

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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