Detail Information

Basic Information:


  VIRBase ID:  

VHID00178154

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:           CEP89:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H11-5p CEP89
miRBase
Accession/Entrez ID		 MIMAT0014697 84902
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - CCDC123//CEP123

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CEP89
chr19:33439846(-) A-I      intronic
chr19:33376407(-) A-I      intronic
chr19:33389603(-) A-I      intronic
chr19:33376400(-) A-I      intronic
chr19:33376375(-) A-I      intronic
chr19:33439835(-) A-I      intronic
chr19:33439847(-) A-I      intronic
chr19:33389622(-) A-I      intronic
chr19:33389596(-) A-I      intronic
chr19:33389615(-) A-I      intronic
chr19:33420325(-) A-I      intronic
chr19:33418982(-) A-I      intronic
chr19:33418966(-) A-I      intronic
chr19:33418855(-) A-I      intronic
chr19:33418686(-) A-I      intronic
chr19:33418679(-) A-I      intronic
chr19:33418675(-) A-I      intronic
chr19:33418671(-) A-I      intronic
chr19:33418603(-) A-I      intronic
chr19:33418596(-) A-I      intronic
chr19:33405748(-) A-I      intronic
chr19:33403062(-) A-I      intronic
chr19:33403047(-) A-I      intronic
chr19:33389688(-) A-I      intronic
chr19:33389640(-) A-I      intronic
chr19:33389531(-) A-I      intronic
chr19:33388722(-) A-I      intronic
chr19:33388705(-) A-I      intronic
chr19:33383320(-) A-I      intronic
chr19:33381262(-) A-I      intronic
chr19:33381260(-) A-I      intronic
chr19:33440470(-) A-I      intronic
chr19:33376517(-) A-I      intronic
chr19:33376324(-) A-I      intronic
chr19:33375005(-) A-I      intronic
chr19:33374996(-) A-I      intronic
chr19:33428859(-) A-I      intronic
chr19:33374439(-) A-I      intronic
chr19:33374420(-) A-I      intronic
chr19:33374417(-) A-I      intronic
chr19:33374411(-) A-I      intronic
chr19:33373454(-) A-I      intronic
chr19:33459357(-) A-I      intronic
chr19:33421198(-) A-I      intronic
chr19:33421171(-) A-I      intronic
chr19:33421165(-) A-I      intronic
chr19:33421096(-) A-I      intronic
chr19:33421076(-) A-I      intronic
chr19:33383390(-) A-I      intronic
chr19:33383400(-) A-I      intronic
chr19:33432297(-) A-I      intronic
chr19:33432407(-) A-I      intronic
chr19:33434057(-) A-I      intronic
chr19:33434058(-) A-I      intronic
chr19:33434447(-) A-I      intronic
chr19:33434462(-) A-I      intronic
chr19:33438780(-) A-I      intronic
chr19:33439795(-) A-I      intronic
chr19:33439813(-) A-I      intronic
chr19:33441220(-) A-I      intronic
chr19:33441221(-) A-I      intronic
chr19:33441248(-) A-I      intronic
chr19:33441260(-) A-I      intronic
chr19:33441292(-) A-I      intronic
chr19:33441315(-) A-I      intronic
chr19:33442329(-) A-I      intronic
chr19:33442358(-) A-I      intronic
chr19:33445515(-) A-I      intronic
chr19:33452409(-) A-I      intronic
chr19:33454248(-) A-I      intronic
chr19:33456185(-) A-I      intronic
chr19:33459349(-) A-I      intronic
chr19:33383413(-) A-I      intronic
chr19:33421029(-) A-I      intronic
chr19:33421028(-) A-I      intronic
chr19:33421017(-) A-I      intronic
chr19:33421000(-) A-I      intronic
chr19:33420999(-) A-I      intronic
chr19:33432287(-) A-I      intronic
chr19:33432179(-) A-I      intronic
chr19:33432164(-) A-I      intronic
chr19:33428995(-) A-I      intronic
chr19:33455216(-) A-I      intronic
chr19:33441445(-) A-I      intronic
chr19:33420451(-) A-I      intronic
chr19:33421206(-) A-I      intronic
chr19:33390258(-) A-I      intronic
chr19:33374567(-) A-I      intronic
chr19:33411258(-) A-I      intronic
chr19:33411027(-) A-I      intronic
chr19:33420328(-) A-I      intronic
chr19:33441451(-) A-I      intronic
chr19:33448414(-) A-I      intronic
chr19:33434130(-) A-I      intronic
chr19:33418608(-) A-I      intronic
chr19:33440987(-) A-I      intronic
chr19:33390161(-) A-I      intronic
chr19:33374459(-) A-I      intronic
chr19:33446101(-) A-I      intronic
chr19:33411636(-) A-I      intronic
chr19:33376365(-) A-I      intronic
chr19:33432346(-) A-I      intronic
chr19:33421907(-) A-I      intronic
chr19:33440960(-) A-I      intronic
chr19:33452822(-) A-I      intronic
chr19:33378357(-) A-I      intronic
chr19:33376501(-) A-I      intronic
chr19:33418919(-) A-I      intronic
chr19:33377864(-) A-I      intronic
chr19:33435094(-) A-I      intronic
chr19:33411082(-) A-I      intronic
chr19:33455949(-) A-I      intronic
chr19:33418900(-) A-I      intronic
chr19:33385041(-) A-I      intronic
chr19:33389570(-) A-I      intronic
chr19:33373374(-) A-I      intronic
chr19:33449419(-) A-I      intronic
chr19:33374980(-) A-I      intronic
chr19:33376478(-) A-I      intronic
chr19:33428876(-) A-I      intronic
chr19:33420503(-) A-I      intronic
chr19:33409961(-) A-I      intronic
chr19:33418790(-) A-I      intronic
chr19:33418937(-) A-I      intronic
chr19:33434178(-) A-I      intronic
chr19:33441364(-) A-I      intronic
chr19:33443698(-) A-I      intronic
chr19:33398463(-) A-I      intronic
chr19:33405779(-) A-I      intronic
chr19:33447100(-) A-I      intronic
chr19:33411591(-) A-I      intronic
chr19:33404971(-) A-I      intronic
chr19:33434162(-) A-I      intronic
chr19:33420456(-) A-I      intronic
chr19:33381243(-) A-I      intronic
chr19:33439719(-) A-I      intronic
chr19:33377818(-) A-I      intronic
chr19:33411212(-) A-I      intronic
chr19:33378091(-) A-I      intronic
chr19:33449571(-) A-I      intronic
chr19:33421207(-) A-I      intronic
chr19:33445349(-) A-I      intronic
chr19:33378208(-) A-I      intronic
chr19:33438529(-) A-I      intronic
chr19:33410066(-) A-I      intronic
chr19:33431734(-) A-I      intronic
chr19:33422071(-) A-I      intronic
chr19:33409929(-) A-I      intronic
chr19:33445385(-) A-I      intronic
chr19:33420507(-) A-I      intronic
chr19:33440522(-) A-I      intronic
chr19:33441378(-) A-I      intronic
chr19:33440454(-) A-I      intronic
chr19:33388723(-) A-I      intronic
chr19:33448594(-) A-I      intronic
chr19:33373437(-) A-I      intronic
chr19:33447500(-) A-I      intronic
chr19:33379854(-) A-I      intronic
chr19:33413203(-) A-I      intronic
chr19:33376319(-) A-I      intronic
chr19:33410968(-) A-I      intronic
chr19:33418766(-) A-I      intronic
chr19:33431939(-) A-I      intronic
chr19:33431804(-) A-I      intronic
chr19:33428810(-) A-I      intronic
chr19:33448559(-) A-I      intronic
chr19:33372353(-) A-I      intronic
chr19:33440988(-) A-I      intronic
chr19:33390239(-) A-I      intronic
chr19:33431763(-) A-I      intronic
chr19:33434479(-) A-I      intronic
chr19:33381158(-) A-I      intronic
chr19:33445964(-) A-I      intronic
chr19:33448794(-) A-I      intronic
chr19:33432365(-) A-I      intronic
chr19:33441381(-) A-I      intronic
chr19:33410064(-) A-I      intronic
chr19:33420461(-) A-I      intronic
chr19:33448604(-) A-I      intronic
chr19:33411042(-) A-I      intronic
chr19:33439833(-) A-I      intronic
chr19:33392616(-) A-I      intronic
chr19:33456018(-) A-I      intronic
chr19:33418986(-) A-I      intronic
chr19:33435073(-) A-I      intronic
chr19:33405004(-) A-I      intronic
chr19:33418985(-) A-I      intronic
chr19:33421213(-) A-I      intronic
chr19:33420930(-) A-I      intronic
chr19:33373393(-) A-I      intronic
chr19:33448550(-) A-I      intronic
chr19:33446111(-) A-I      intronic
chr19:33438553(-) A-I      intronic
chr19:33411022(-) A-I      intronic
chr19:33420439(-) A-I      intronic
chr19:33374545(-) A-I      intronic
chr19:33439745(-) A-I      intronic
chr19:33411076(-) A-I      intronic
chr19:33398184(-) A-I      intronic
chr19:33398185(-) A-I      intronic
chr19:33428808(-) A-I      intronic
chr19:33441036(-) A-I      intronic
chr19:33439883(-) A-I      intronic
chr19:33411108(-) A-I      intronic
chr19:33441425(-) A-I      intronic
chr19:33438486(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CEP89
chr19:33461356(-) A-I intron -    22327324
chr19:33461566(-) A-T intron -    21725310
chr19:33461566(-) A-G intron -    21725310
chr19:33461356(-) A-G intron -    22484847
chr19:33461540(-) A-G intron -    22484847
chr19:33461673(-) A-G intron -    22484847
chr19:33461875(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CEP89
chr19:33367490-33367491(-) m6A 3'UTR//intron       -
chr19:33367519-33367520(-) m6A 3'UTR//intron       -
chr19:33367542-33367543(-) m6A 3'UTR//intron       -
chr19:33367548-33367549(-) m6A 3'UTR//intron       -
chr19:33370128-33370129(-) m6A 3'UTR//CDS       25456834//24981863//27371828
chr19:33370179-33370180(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33370192-33370193(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33370206-33370207(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33370217-33370218(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33370233-33370234(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33370268-33370269(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33372752-33372753(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828//27773536
chr19:33372770-33372771(-) m6A 3'UTR//CDS       25456834//27773535//27371828//27773536
chr19:33372788-33372789(-) m6A 3'UTR//CDS       27773535//27371828//27773536
chr19:33372837-33372838(-) m6A 3'UTR//CDS       27773535//27371828//27773536
chr19:33372851-33372852(-) m6A 3'UTR//CDS       27773535//27371828//27773536
chr19:33372884-33372885(-) m6A 3'UTR//CDS       27773535
chr19:33390796-33390797(-) m6A 3'UTR//CDS       27773535
chr19:33390817-33390818(-) m6A 3'UTR//CDS       27773535
chr19:33392176-33392177(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33392195-33392196(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33392213-33392214(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33406303-33406304(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33406310-33406311(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33406343-33406344(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33406350-33406351(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33406381-33406382(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33406406-33406407(-) m6A 3'UTR//CDS       24981863//27773535//27371828
chr19:33409155-33409156(-) m6A 3'UTR//CDS       24981863//27773535//27371828
chr19:33409203-33409204(-) m6A 3'UTR//CDS       27773535
chr19:33409220-33409221(-) m6A 3'UTR//CDS       27773535
chr19:33409231-33409232(-) m6A 3'UTR//CDS       27773535
chr19:33422122-33422123(-) m6A 3'UTR//intron       27773535
chr19:33422130-33422131(-) m6A 3'UTR//intron       27773535
chr19:33422138-33422139(-) m6A 3'UTR//intron       27773535
chr19:33422363-33422364(-) m6A 3'UTR//CDS       27773535
chr19:33422379-33422380(-) m6A 3'UTR//CDS       27773535
chr19:33422433-33422434(-) m6A 3'UTR//CDS       27773535
chr19:33422445-33422446(-) m6A 3'UTR//CDS       27773535
chr19:33424420-33424421(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33424432-33424433(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33424447-33424448(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33424457-33424458(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33424462-33424463(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33424490-33424491(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33424496-33424497(-) m6A 3'UTR//CDS       24981863//27773535
chr19:33428570-33428571(-) m6A CDS       27773535
chr19:33430783-33430784(-) m6A CDS       27773535
chr19:33439183-33439184(-) m6A CDS       27773535
chr19:33439251-33439252(-) m6A CDS       27773535
chr19:33444569-33444570(-) m6A CDS       27773535
chr19:33444621-33444622(-) m6A CDS       27773535//27371828
chr19:33444629-33444630(-) m6A CDS       27773535//27371828
chr19:33444647-33444648(-) m6A CDS       27773535//27371828
chr19:33444654-33444655(-) m6A CDS       27773535//27371828
chr19:33450850-33450851(-) m6A CDS       27773535
chr19:33450855-33450856(-) m6A CDS       27773535
chr19:33457369-33457370(-) m6A CDS//exon       24981863//27773535
chr19:33459831-33459832(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr19:33459890-33459891(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085
chr19:33459974-33459975(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr19:33459984-33459985(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr19:33460031-33460032(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr19:33460136-33460137(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:33460200-33460201(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:33460273-33460274(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr19:33460395-33460396(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr19:33460505-33460506(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:33460630-33460631(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr19:33460686-33460687(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773536//22608085
chr19:33460732-33460733(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773536//22608085
chr19:33460800-33460801(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773536//22608085
chr19:33460813-33460814(-) m6A 3'UTR//intron       25456834
chr19:33460826-33460827(-) m6A 3'UTR//intron       25456834
chr19:33460963-33460964(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr19:33461046-33461047(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr19:33461143-33461144(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr19:33461149-33461150(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr19:33461184-33461185(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr19:33461255-33461256(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr19:33461353-33461354(-) m6A 3'UTR//intron       27773535
chr19:33462044-33462045(-) m6A 3'UTR//intron       24284625//24981863//27773535
chr19:33462265-33462266(-) m6A 3'UTR//exon//intron       24284625//25456834//24981863//27773535//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CEP89
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H11-5p
Interactor2: CEP89

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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