Basic Information:

  VIRBase ID:  

VHID00178076

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          PADI3:  NM_016233     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	PADI3
miRBase Accession/Entrez ID	MIMAT0014697	51702
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PAD3//PDI3//UHS1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PADI3	chr1:17588283(+) A-I      intronic chr1:17598222(+) A-I      intronic chr1:17601825(+) A-I      intronic chr1:17601817(+) A-I      intronic chr1:17602653(+) A-I      intronic chr1:17591310(+) A-I      intronic chr1:17591305(+) A-I      intronic chr1:17601811(+) A-I      intronic chr1:17591315(+) A-I      intronic chr1:17603872(+) A-I      intronic chr1:17601676(+) A-I      intronic chr1:17599051(+) A-I      intronic chr1:17603855(+) A-I      intronic chr1:17603869(+) A-I      intronic chr1:17602711(+) A-I      intronic chr1:17602685(+) A-I      intronic chr1:17599102(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PADI3	chr1:17609560-17609561(+) m6A CDS       24284625//24981863 chr1:17609575-17609576(+) m6A 3'UTR       24284625//24981863 chr1:17609632-17609633(+) m6A 3'UTR       24284625//25456834//24981863 chr1:17609638-17609639(+) m6A 3'UTR       24284625//25456834//24981863 chr1:17609667-17609668(+) m6A 3'UTR       24284625//25456834//24981863 chr1:17609687-17609688(+) m6A 3'UTR       24284625//25456834//24981863 chr1:17609767-17609768(+) m6A 3'UTR       24284625//25456834//24981863 chr1:17609799-17609800(+) m6A 3'UTR       24284625//25456834//24981863 chr1:17609882-17609883(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: PADI3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg