Detail Information

Basic Information:


  VIRBase ID:  

VHID00177254

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:           DMBX1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H10 DMBX1
miRBase
Accession/Entrez ID
MIMAT0014353 127343
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - MBX//OTX3//PAXB

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DMBX1
chr1:46978080-46978081(+) m6A CDS       24981863
chr1:46978088-46978089(+) m6A CDS       24981863
chr1:46978104-46978105(+) m6A CDS       24981863
chr1:46978144-46978145(+) m6A CDS       24981863
chr1:46979212-46979213(+) m6A 3'UTR       22608085
chr1:46979242-46979243(+) m6A 3'UTR       22608085
chr1:46979277-46979278(+) m6A 3'UTR       22608085
chr1:46979324-46979325(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H10
Exosome K562 cells     24460325
DMBX1
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H10
Interactor2: DMBX1

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//RNAHybrid
Support Database RepTar//VmiReg

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