Basic Information:

  VIRBase ID:  

VHID00177176

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          AGAP2:  NM_014770     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	AGAP2
miRBase Accession/Entrez ID	MIMAT0014353	116986
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CENTG1//GGAP2//PIKE

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AGAP2	chr12:58123815(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AGAP2	chr12:58118761-58118762(-) m6A 3'UTR       24209618 chr12:58118770-58118771(-) m6A 3'UTR       24209618 chr12:58118861-58118862(-) m6A 3'UTR       - chr12:58119378-58119379(-) m6A 3'UTR       24209618 chr12:58119666-58119667(-) m6A 3'UTR       - chr12:58119720-58119721(-) m6A 3'UTR       27371828 chr12:58119736-58119737(-) m6A 3'UTR       27371828 chr12:58119786-58119787(-) m6A 3'UTR       27371828 chr12:58119849-58119850(-) m6A 3'UTR       27371828 chr12:58119868-58119869(-) m6A 3'UTR       27371828 chr12:58119982-58119983(-) m6A 3'UTR       24209618//25456834//24981863//27371828//22608085 chr12:58120018-58120019(-) m6A 3'UTR       24209618//25456834//24981863//27371828//22608085 chr12:58120134-58120135(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr12:58120166-58120167(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr12:58120172-58120173(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr12:58120265-58120266(-) m6A 3'UTR       24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr12:58120273-58120274(-) m6A 3'UTR       24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr12:58120317-58120318(-) m6A 3'UTR       24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr12:58120829-58120830(-) m6A CDS       27371828 chr12:58121151-58121152(-) m6A CDS       24284625 chr12:58121262-58121263(-) m6A CDS       24284625//24981863 chr12:58121343-58121344(-) m6A CDS       24284625//24981863 chr12:58121477-58121478(-) m6A CDS       24284625//24981863 chr12:58121543-58121544(-) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr12:58121861-58121862(-) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr12:58122140-58122141(-) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr12:58123448-58123449(-) m6A CDS       24981863//22608085 chr12:58123509-58123510(-) m6A CDS       27371828 chr12:58123531-58123532(-) m6A CDS       27371828 chr12:58124169-58124170(-) m6A 3'UTR//intron       27371828 chr12:58124306-58124307(-) m6A CDS       24981863 chr12:58124323-58124324(-) m6A CDS       24981863 chr12:58124331-58124332(-) m6A CDS       24981863 chr12:58124605-58124606(-) m6A CDS       - chr12:58124690-58124691(-) m6A CDS       - chr12:58124701-58124702(-) m6A CDS       - chr12:58131177-58131178(-) m6A CDS//intron       25456834//24981863//27371828//22608085 chr12:58131199-58131200(-) m6A CDS//intron       25456834//24981863//27371828//22608085 chr12:58131206-58131207(-) m6A CDS//intron       24209618//25456834//24981863//27371828//22608085 chr12:58131341-58131342(-) m6A CDS//intron       25456834//27371828//27773536 chr12:58131455-58131456(-) m6A CDS//intron       27371828//27773536 chr12:58131651-58131652(-) m6A CDS//intron       24209618//27371828//27773536 chr12:58131669-58131670(-) m6A CDS//intron       24209618//27371828//27773536 chr12:58131884-58131885(-) m6A CDS//intron       27371828//27773536 chr12:58131995-58131996(-) m6A CDS//intron       27371828//27773536 chr12:58135705-58135706(-) m6A CDS       27371828//27773536 chr12:58135726-58135727(-) m6A CDS       27371828//27773536 chr12:58135734-58135735(-) m6A CDS       27371828 chr12:58135774-58135775(-) m6A CDS       27371828 chr12:58135868-58135869(-) m6A 5'UTR       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	AGAP2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: AGAP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg