Detail Information

Basic Information:


  VIRBase ID:  

VHID00177163

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:           OSR2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H10 OSR2
miRBase
Accession/Entrez ID
MIMAT0014353 116039
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OSR2
chr8:99956860-99956861(+) m6A 5'UTR//exon       24981863
chr8:99956968-99956969(+) m6A 5'UTR//exon       24284625//24981863
chr8:99957007-99957008(+) m6A 5'UTR//exon       24981863
chr8:99958267-99958268(+) m6A exon//intron       -
chr8:99961262-99961263(+) m6A CDS//exon//intron       24284625//24981863
chr8:99961283-99961284(+) m6A CDS//exon//intron       24284625//24981863
chr8:99961321-99961322(+) m6A CDS//exon//intron       24284625//24981863
chr8:99961334-99961335(+) m6A CDS//exon//intron       24284625//24981863
chr8:99961514-99961515(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr8:99961583-99961584(+) m6A CDS       24284625//24981863//22575960//22608085
chr8:99961605-99961606(+) m6A CDS       24284625//24981863//22575960//22608085
chr8:99961646-99961647(+) m6A CDS       24284625//24981863//22575960//22608085
chr8:99961716-99961717(+) m6A CDS       24284625//24981863//22608085
chr8:99961756-99961757(+) m6A CDS       -
chr8:99963921-99963922(+) m6A 3'UTR//CDS       24284625
chr8:99963974-99963975(+) m6A 3'UTR       24284625//24981863
chr8:99964090-99964091(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H10
Exosome K562 cells     24460325
OSR2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H10
Interactor2: OSR2

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...