Basic Information:

  VIRBase ID:  

VHID00176778

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          CPTP:  NM_001029885     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	CPTP
miRBase Accession/Entrez ID	MIMAT0014353	80772
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GLTPD1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CPTP	chr1:1260221-1260222(+) m6A 5'UTR//exon       24981863 chr1:1260332-1260333(+) m6A 5'UTR//exon       24284625 chr1:1260431-1260432(+) m6A 5'UTR//exon       24284625 chr1:1260437-1260438(+) m6A 5'UTR//exon       24284625 chr1:1262378-1262379(+) m6A CDS//intron       24284625 chr1:1262628-1262629(+) m6A CDS//exon       24284625 chr1:1262775-1262776(+) m6A CDS//exon       24284625 chr1:1263132-1263133(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263243-1263244(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263286-1263287(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263293-1263294(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263349-1263350(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263507-1263508(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr1:1263600-1263601(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263640-1263641(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263672-1263673(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263749-1263750(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263761-1263762(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263777-1263778(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263822-1263823(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1263940-1263941(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1264018-1264019(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1264034-1264035(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1264048-1264049(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1264076-1264077(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1264140-1264141(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1264188-1264189(+) m6A 3'UTR       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	CPTP	Chromatin K562 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: CPTP

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg