Basic Information:

  VIRBase ID:  

VHID00176501

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          PRDM13:  NM_021620     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	PRDM13
miRBase Accession/Entrez ID	MIMAT0014353	59336
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MU-MB-20.220//PFM10

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRDM13	chr6:100061277-100061278(+) m6A 3'UTR//CDS       - chr6:100061289-100061290(+) m6A 3'UTR//CDS       - chr6:100061311-100061312(+) m6A 3'UTR//CDS       - chr6:100062135-100062136(+) m6A 3'UTR//CDS       24981863//22608085 chr6:100062221-100062222(+) m6A 3'UTR//CDS       24981863//22608085 chr6:100062441-100062442(+) m6A 3'UTR//CDS       22608085 chr6:100062665-100062666(+) m6A 3'UTR       25456834//24981863//22608085 chr6:100062703-100062704(+) m6A 3'UTR       25456834//24981863//22608085 chr6:100062725-100062726(+) m6A 3'UTR       25456834//24981863//22608085 chr6:100062734-100062735(+) m6A 3'UTR       25456834//24981863//22608085 chr6:100062739-100062740(+) m6A 3'UTR       25456834//24981863//22608085 chr6:100062774-100062775(+) m6A 3'UTR       25456834//24981863//22608085 chr6:100062804-100062805(+) m6A 3'UTR       24981863//22608085 chr6:100062891-100062892(+) m6A 3'UTR       24981863//22608085 chr6:100062915-100062916(+) m6A 3'UTR       24981863//22608085 chr6:100063099-100063100(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	PRDM13	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: PRDM13

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg