Basic Information:

  VIRBase ID:  

VHID00176116

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          SLC37A1:  NM_001320537     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	SLC37A1
miRBase Accession/Entrez ID	MIMAT0014353	54020
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	G3PP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC37A1	chr21:44000694(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC37A1	chr21:43989642(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC37A1	chr21:43938430-43938431(+) m6A 5'UTR//exon       - chr21:43946068-43946069(+) m6A exon//intron       - chr21:43946083-43946084(+) m6A exon//intron       - chr21:43974199-43974200(+) m6A CDS       - chr21:43974209-43974210(+) m6A CDS       - chr21:43974219-43974220(+) Cm CDS       - chr21:43999900-43999901(+) m6A CDS       24284625//25456834 chr21:44000463-44000464(+) m6A CDS       24284625//25456834//24981863 chr21:44000530-44000531(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44000539-44000540(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44000601-44000602(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44000621-44000622(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44000645-44000646(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44000657-44000658(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44000682-44000683(+) m6A 3'UTR       24284625//25456834//24981863 chr21:44000707-44000708(+) m6A 3'UTR       24284625//25456834//24981863 chr21:44000714-44000715(+) m6A 3'UTR       25456834//24981863 chr21:44000842-44000843(+) m6A 3'UTR       24284625//25456834//24981863 chr21:44000885-44000886(+) m6A 3'UTR       24284625//25456834//24981863 chr21:44000908-44000909(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828 chr21:44000913-44000914(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828 chr21:44000930-44000931(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr21:44001002-44001003(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr21:44001019-44001020(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr21:44001067-44001068(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr21:44001079-44001080(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr21:44001342-44001343(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44001366-44001367(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr21:44001415-44001416(+) m6A 3'UTR       24284625//24981863 chr21:44001444-44001445(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	SLC37A1	Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: SLC37A1

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg