Basic Information:

  VIRBase ID:  

VHID00175700

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          MAPK8IP3:  NM_001040439     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	MAPK8IP3
miRBase Accession/Entrez ID	MIMAT0014353	23162
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	JIP-3//JIP3//JSAP1//NEDBA//syd//SYD2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAPK8IP3	chr16:1818604(+) A-I      NonSyn:Glu->Gly chr16:1804164(+) A-I      intronic chr16:1806281(+) A-I      intronic chr16:1800796(+) A-I      intronic chr16:1806338(+) A-I      intronic chr16:1807232(+) A-I      intronic chr16:1801280(+) A-I      intronic chr16:1801261(+) A-I      intronic chr16:1800827(+) A-I      intronic chr16:1800844(+) A-I      intronic chr16:1802629(+) A-I      intronic chr16:1775365(+) A-I      intronic chr16:1775367(+) A-I      intronic chr16:1775373(+) A-I      intronic chr16:1775379(+) A-I      intronic chr16:1803355(+) A-I      intronic chr16:1804094(+) A-I      intronic chr16:1800792(+) A-I      intronic chr16:1804115(+) A-I      intronic chr16:1804119(+) A-I      intronic chr16:1801285(+) A-I      intronic chr16:1775428(+) A-I      intronic chr16:1776500(+) A-I      intronic chr16:1800313(+) A-I      intronic chr16:1800411(+) A-I      intronic chr16:1802660(+) A-I      intronic chr16:1800414(+) A-I      intronic chr16:1800747(+) A-I      intronic chr16:1775828(+) A-I      intronic chr16:1775883(+) A-I      intronic chr16:1775897(+) A-I      intronic chr16:1775947(+) A-I      intronic chr16:1800786(+) A-I      intronic chr16:1801185(+) A-I      intronic chr16:1801210(+) A-I      intronic chr16:1801295(+) A-I      intronic chr16:1801298(+) A-I      intronic chr16:1801345(+) A-I      intronic chr16:1801366(+) A-I      intronic chr16:1807223(+) A-I      intronic chr16:1807187(+) A-I      intronic chr16:1807171(+) A-I      intronic chr16:1806751(+) A-I      intronic chr16:1802488(+) A-I      intronic chr16:1802599(+) A-I      intronic chr16:1802628(+) A-I      intronic chr16:1802647(+) A-I      intronic chr16:1802653(+) A-I      intronic chr16:1803310(+) A-I      intronic chr16:1803383(+) A-I      intronic chr16:1803419(+) A-I      intronic chr16:1803503(+) A-I      intronic chr16:1803511(+) A-I      intronic chr16:1803571(+) A-I      intronic chr16:1803581(+) A-I      intronic chr16:1803607(+) A-I      intronic chr16:1803624(+) A-I      intronic chr16:1803627(+) A-I      intronic chr16:1803649(+) A-I      intronic chr16:1803678(+) A-I      intronic chr16:1806712(+) A-I      intronic chr16:1806708(+) A-I      intronic chr16:1803704(+) A-I      intronic chr16:1803958(+) A-I      intronic chr16:1804028(+) A-I      intronic chr16:1804053(+) A-I      intronic chr16:1804059(+) A-I      intronic chr16:1804724(+) A-I      intronic chr16:1805728(+) A-I      intronic chr16:1806285(+) A-I      intronic chr16:1806312(+) A-I      intronic chr16:1806551(+) A-I      intronic chr16:1806448(+) A-I      intronic chr16:1806512(+) A-I      intronic chr16:1806529(+) A-I      intronic chr16:1760389(+) A-I      intronic chr16:1761696(+) A-I      intronic chr16:1761703(+) A-I      intronic chr16:1761765(+) A-I      intronic chr16:1761776(+) A-I      intronic chr16:1762143(+) A-I      intronic chr16:1762238(+) A-I      intronic chr16:1762244(+) A-I      intronic chr16:1766398(+) A-I      intronic chr16:1766399(+) A-I      intronic chr16:1767914(+) A-I      intronic chr16:1800776(+) A-I      intronic chr16:1768303(+) A-I      intronic chr16:1768743(+) A-I      intronic chr16:1769558(+) A-I      intronic chr16:1769618(+) A-I      intronic chr16:1770960(+) A-I      intronic chr16:1771083(+) A-I      intronic chr16:1771123(+) A-I      intronic chr16:1771130(+) A-I      intronic chr16:1773368(+) A-I      intronic chr16:1773370(+) A-I      intronic chr16:1773474(+) A-I      intronic chr16:1807367(+) A-I      intronic chr16:1803522(+) A-I      intronic chr16:1806335(+) A-I      intronic chr16:1768521(+) A-I      intronic chr16:1800416(+) A-I      intronic chr16:1804597(+) A-I      intronic chr16:1804668(+) A-I      intronic chr16:1802515(+) A-I      intronic chr16:1770772(+) A-I      intronic chr16:1761671(+) A-I      intronic chr16:1773514(+) A-I      intronic chr16:1807287(+) A-I      intronic chr16:1766428(+) A-I      intronic chr16:1801412(+) A-I      intronic chr16:1804717(+) A-I      intronic chr16:1769581(+) A-I      intronic chr16:1803397(+) A-I      intronic chr16:1806702(+) A-I      intronic chr16:1766804(+) A-I      intronic chr16:1800265(+) A-I      intronic chr16:1804027(+) A-I      intronic chr16:1801294(+) A-I      intronic chr16:1800710(+) A-I      intronic chr16:1801385(+) A-I      intronic chr16:1768684(+) A-I      intronic chr16:1768205(+) A-I      intronic chr16:1800239(+) A-I      intronic chr16:1806384(+) A-I      intronic chr16:1761731(+) A-I      intronic chr16:1803703(+) A-I      intronic chr16:1766805(+) A-I      intronic chr16:1803343(+) A-I      intronic chr16:1771214(+) A-I      intronic chr16:1807247(+) A-I      intronic chr16:1773288(+) A-I      intronic chr16:1762180(+) A-I      intronic chr16:1800339(+) A-I      intronic chr16:1771598(+) A-I      intronic chr16:1760105(+) A-I      intronic chr16:1806802(+) A-I      intronic chr16:1773152(+) A-I      intronic chr16:1800466(+) A-I      intronic chr16:1806534(+) A-I      intronic chr16:1801369(+) A-I      intronic chr16:1761837(+) A-I      intronic chr16:1769651(+) A-I      intronic chr16:1771977(+) A-I      intronic chr16:1804612(+) A-I      intronic chr16:1761873(+) A-I      intronic chr16:1801271(+) A-I      intronic chr16:1801281(+) A-I      intronic chr16:1768325(+) A-I      intronic chr16:1766496(+) A-I      intronic chr16:1806772(+) A-I      intronic chr16:1800921(+) A-I      intronic chr16:1800307(+) A-I      intronic chr16:1807181(+) A-I      intronic chr16:1775489(+) A-I      intronic chr16:1766479(+) A-I      intronic chr16:1804713(+) A-I      intronic chr16:1768941(+) A-I      intronic chr16:1766660(+) A-I      intronic chr16:1801201(+) A-I      intronic chr16:1803415(+) A-I      intronic chr16:1801420(+) A-I      intronic chr16:1804541(+) A-I      intronic chr16:1807245(+) A-I      intronic chr16:1800388(+) A-I      intronic chr16:1801202(+) A-I      intronic chr16:1806777(+) A-I      intronic chr16:1803991(+) A-I      intronic chr16:1804617(+) A-I      intronic chr16:1807381(+) A-I      intronic chr16:1804007(+) A-I      intronic chr16:1807312(+) A-I      intronic chr16:1768648(+) A-I      intronic chr16:1804608(+) A-I      intronic chr16:1804001(+) A-I      intronic chr16:1800491(+) A-I      intronic chr16:1800343(+) A-I      intronic chr16:1806537(+) A-I      intronic chr16:1806799(+) A-I      intronic chr16:1776475(+) A-I      intronic chr16:1807132(+) A-I      intronic chr16:1771985(+) A-I      intronic chr16:1771347(+) A-I      intronic chr16:1768061(+) A-I      intronic chr16:1768675(+) A-I      intronic chr16:1800314(+) A-I      intronic chr16:1762269(+) A-I      intronic chr16:1800349(+) A-I      intronic chr16:1770070(+) A-I      intronic chr16:1768609(+) A-I      intronic chr16:1802670(+) A-I      intronic chr16:1801401(+) A-I      intronic chr16:1768608(+) A-I      intronic chr16:1800919(+) A-I      intronic chr16:1766393(+) A-I      intronic chr16:1762261(+) A-I      intronic chr16:1803716(+) A-I      intronic chr16:1800269(+) A-I      intronic chr16:1762192(+) A-I      intronic chr16:1806716(+) A-I      intronic chr16:1801333(+) A-I      intronic chr16:1805741(+) A-I      intronic chr16:1766739(+) A-I      intronic chr16:1762324(+) A-I      intronic chr16:1803394(+) A-I      intronic chr16:1800821(+) A-I      intronic chr16:1804651(+) A-I      intronic chr16:1807290(+) A-I      intronic chr16:1800746(+) A-I      intronic chr16:1806559(+) A-I      intronic chr16:1781143(+) A-I      intronic chr16:1803393(+) A-I      intronic chr16:1767144(+) A-I      intronic chr16:1770220(+) A-I      intronic chr16:1776412(+) A-I      intronic chr16:1775755(+) A-I      intronic chr16:1806415(+) A-I      intronic chr16:1769740(+) A-I      intronic chr16:1801340(+) A-I      intronic chr16:1805594(+) A-I      intronic chr16:1801349(+) A-I      intronic chr16:1806692(+) A-I      intronic chr16:1771501(+) A-I      intronic chr16:1769580(+) A-I      intronic chr16:1806522(+) A-I      intronic chr16:1768540(+) A-I      intronic chr16:1806768(+) A-I      intronic chr16:1767152(+) A-I      intronic chr16:1768751(+) A-I      intronic chr16:1800318(+) A-I      intronic chr16:1769694(+) A-I      intronic chr16:1760215(+) A-I      intronic chr16:1803368(+) A-I      intronic chr16:1770317(+) A-I      intronic chr16:1805717(+) A-I      intronic chr16:1805749(+) A-I      intronic chr16:1807379(+) A-I      intronic chr16:1804095(+) A-I      intronic chr16:1804126(+) A-I      intronic chr16:1800359(+) A-I      intronic chr16:1766578(+) A-I      intronic chr16:1801339(+) A-I      intronic chr16:1772610(+) A-I      intronic chr16:1806743(+) A-I      intronic chr16:1803903(+) A-I      intronic chr16:1767044(+) A-I      intronic chr16:1803917(+) A-I      intronic chr16:1805803(+) A-I      intronic chr16:1801313(+) A-I      intronic chr16:1765786(+) A-I      intronic chr16:1807126(+) A-I      intronic chr16:1760106(+) A-I      intronic chr16:1771019(+) A-I      intronic chr16:1804557(+) A-I      intronic chr16:1804718(+) A-I      intronic chr16:1803341(+) A-I      intronic chr16:1801270(+) A-I      intronic chr16:1766873(+) A-I      intronic chr16:1806550(+) A-I      intronic chr16:1766811(+) A-I      intronic chr16:1801405(+) A-I      intronic chr16:1803971(+) A-I      intronic chr16:1804558(+) A-I      intronic chr16:1806506(+) A-I      intronic chr16:1773367(+) A-I      intronic chr16:1775905(+) A-I      intronic chr16:1801207(+) A-I      intronic chr16:1800830(+) A-I      intronic chr16:1804665(+) A-I      intronic chr16:1803356(+) A-I      intronic chr16:1804131(+) A-I      intronic chr16:1772608(+) A-I      intronic chr16:1775517(+) A-I      intronic chr16:1801389(+) A-I      intronic chr16:1768619(+) A-I      intronic chr16:1803986(+) A-I      intronic chr16:1804503(+) A-I      intronic chr16:1803342(+) A-I      intronic chr16:1804063(+) A-I      intronic chr16:1806380(+) A-I      intronic chr16:1768539(+) A-I      intronic chr16:1801417(+) A-I      intronic chr16:1803382(+) A-I      intronic chr16:1806805(+) A-I      intronic chr16:1771187(+) A-I      intronic chr16:1768744(+) A-I      intronic chr16:1806574(+) A-I      intronic chr16:1761923(+) A-I      intronic chr16:1800394(+) A-I      intronic chr16:1771009(+) A-I      intronic chr16:1801273(+) A-I      intronic chr16:1766910(+) A-I      intronic chr16:1803349(+) A-I      intronic chr16:1802542(+) A-I      intronic chr16:1802472(+) A-I      intronic chr16:1806396(+) A-I      intronic chr16:1762293(+) A-I      intronic chr16:1770139(+) A-I      intronic chr16:1807235(+) A-I      intronic chr16:1804106(+) A-I      intronic chr16:1801243(+) A-I      intronic chr16:1761694(+) A-I      intronic chr16:1807365(+) A-I      intronic chr16:1806360(+) A-I      intronic chr16:1801464(+) A-I      intronic chr16:1801442(+) A-I      intronic chr16:1761844(+) A-I      intronic chr16:1801279(+) A-I      intronic chr16:1805755(+) A-I      intronic chr16:1771149(+) A-I      intronic chr16:1806313(+) A-I      intronic chr16:1806473(+) A-I      intronic chr16:1804595(+) A-I      intronic chr16:1800353(+) A-I      intronic chr16:1801380(+) A-I      intronic chr16:1803987(+) A-I      intronic chr16:1802562(+) A-I      intronic chr16:1804563(+) A-I      intronic chr16:1773122(+) A-I      intronic chr16:1802665(+) A-I      intronic chr16:1805769(+) A-I      intronic chr16:1775507(+) A-I      intronic chr16:1806622(+) A-I      intronic chr16:1802684(+) A-I      intronic chr16:1771707(+) A-I      intronic chr16:1771910(+) A-I      intronic chr16:1769075(+) A-I      intronic chr16:1807366(+) A-I      intronic chr16:1768566(+) A-I      intronic chr16:1802482(+) A-I      intronic chr16:1766913(+) A-I      intronic chr16:1801247(+) A-I      intronic chr16:1762338(+) A-I      intronic chr16:1800317(+) A-I      intronic chr16:1802524(+) A-I      intronic chr16:1804043(+) A-I      intronic chr16:1806425(+) A-I      intronic chr16:1804657(+) A-I      intronic chr16:1804054(+) A-I      intronic chr16:1802602(+) A-I      intronic chr16:1802466(+) A-I      intronic chr16:1770069(+) A-I      intronic chr16:1765990(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MAPK8IP3	chr16:1804503(+) A-I intron -    15342557 chr16:1804541(+) A-I intron -    15342557 chr16:1804558(+) A-I intron -    15342557 chr16:1804563(+) A-I intron -    15342557 chr16:1804595(+) A-I intron -    15342557 chr16:1804617(+) A-I intron -    15342557 chr16:1804651(+) A-I intron -    15342557 chr16:1804665(+) A-I intron -    15342557 chr16:1804718(+) A-I intron -    15342557 chr16:1803397(+) A-I intron -    22327324 chr16:1806716(+) A-I intron -    21960545 chr16:1801380(+) A-G intron -    22484847 chr16:1801385(+) A-G intron -    22484847 chr16:1801412(+) A-G intron -    22484847 chr16:1801442(+) A-G intron -    22484847 chr16:1802466(+) A-G intron -    22484847 chr16:1803397(+) A-G intron -    22484847 chr16:1803522(+) A-G intron -    22484847 chr16:1804095(+) A-G intron -    22484847 chr16:1804106(+) A-G intron -    22484847 chr16:1804558(+) A-G intron -    22484847 chr16:1805717(+) A-G intron -    22484847 chr16:1806522(+) A-G intron -    22484847 chr16:1806559(+) A-G intron -    22484847 chr16:1806702(+) A-G intron -    22484847 chr16:1806777(+) A-G intron -    22484847 chr16:1807367(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAPK8IP3	chr16:1756268-1756269(+) m6A 5'UTR//exon       24209618 chr16:1756533-1756534(+) m6A CDS//exon       22575960 chr16:1756539-1756540(+) m6A CDS//exon       22575960 chr16:1756557-1756558(+) m6A CDS//exon       22575960 chr16:1756596-1756597(+) m6A CDS//exon       22575960 chr16:1774586-1774587(+) m6A CDS//exon       24981863//22575960 chr16:1774663-1774664(+) m6A CDS//exon       24981863//22575960 chr16:1779173-1779174(+) m1A CDS//exon       26863196 chr16:1779496-1779497(+) m6A CDS//exon       24284625//24981863 chr16:1779545-1779546(+) m6A CDS//exon       - chr16:1779553-1779554(+) m6A CDS//exon       - chr16:1795706-1795707(+) m6A exon//intron       25456834 chr16:1795796-1795797(+) m6A exon//intron       - chr16:1796669-1796670(+) m6A exon//intron       - chr16:1796681-1796682(+) m6A exon//intron       - chr16:1796985-1796986(+) m6A exon//intron       - chr16:1797174-1797175(+) m6A CDS//exon       - chr16:1797195-1797196(+) m6A CDS//exon       - chr16:1798280-1798281(+) m6A 3'UTR//CDS//exon       - chr16:1798307-1798308(+) m6A 3'UTR//CDS//exon       - chr16:1798321-1798322(+) m6A 3'UTR//CDS//exon       - chr16:1798331-1798332(+) m6A 3'UTR//CDS//exon       - chr16:1798622-1798623(+) m6A 3'UTR//CDS//exon       - chr16:1809994-1809995(+) m6A 3'UTR//CDS//exon       - chr16:1810011-1810012(+) m6A 3'UTR//CDS//exon       - chr16:1810499-1810500(+) m6A CDS//exon       24981863 chr16:1810524-1810525(+) m6A CDS//exon       24209618//24981863 chr16:1811257-1811258(+) m6A CDS//exon       24981863 chr16:1812421-1812422(+) m6A CDS//exon       24981863 chr16:1812468-1812469(+) m6A CDS//exon       24981863 chr16:1812901-1812902(+) m6A CDS//exon       24981863 chr16:1813805-1813806(+) m6A exon//intron       - chr16:1814140-1814141(+) m6A CDS//exon       - chr16:1814197-1814198(+) m6A CDS//exon       24209618 chr16:1815128-1815129(+) m6A CDS       - chr16:1816002-1816003(+) m6A CDS       - chr16:1816014-1816015(+) m6A CDS       - chr16:1816023-1816024(+) m6A CDS       - chr16:1816116-1816117(+) m6A CDS       - chr16:1816131-1816132(+) m6A CDS       - chr16:1816301-1816302(+) m6A CDS//exon       - chr16:1816324-1816325(+) m6A CDS//exon       - chr16:1816588-1816589(+) m6A CDS//exon       - chr16:1817652-1817653(+) m6A CDS//exon       - chr16:1817706-1817707(+) m6A CDS//exon       - chr16:1818513-1818514(+) m6A CDS//exon       24284625 chr16:1818742-1818743(+) m6A CDS//exon       24284625//24209618 chr16:1818860-1818861(+) m6A 3'UTR//exon       24209618 chr16:1819020-1819021(+) m6A 3'UTR//exon       24284625//25456834 chr16:1819050-1819051(+) m6A 3'UTR       24284625 chr16:1819480-1819481(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr16:1819486-1819487(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr16:1819571-1819572(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr16:1819707-1819708(+) m6A 3'UTR       24284625 chr16:1819793-1819794(+) m6A 3'UTR       24284625 chr16:1819936-1819937(+) m6A 3'UTR       24284625//25456834//24981863 chr16:1820274-1820275(+) m6A 3'UTR       24284625//25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	MAPK8IP3	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: MAPK8IP3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg