Basic Information:

  VIRBase ID:  

VHID00175682

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          PPRC1:  NM_001288727     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	PPRC1
miRBase Accession/Entrez ID	MIMAT0014353	23082
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PRC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PPRC1	chr10:103895764(+) A-I      intronic chr10:103894533(+) A-I      intronic chr10:103894497(+) A-I      intronic chr10:103895744(+) A-I      intronic chr10:103895749(+) A-I      intronic chr10:103903297(+) A-I      intronic chr10:103903276(+) A-I      intronic chr10:103894554(+) A-I      intronic chr10:103895759(+) A-I      intronic chr10:103896919(+) A-I      intronic chr10:103903288(+) A-I      intronic chr10:103903308(+) A-I      intronic chr10:103902043(+) A-I      intronic chr10:103896913(+) A-I      intronic chr10:103896946(+) A-I      intronic chr10:103903229(+) A-I      intronic chr10:103903146(+) A-I      intronic chr10:103903103(+) A-I      intronic chr10:103903281(+) A-I      intronic chr10:103902432(+) A-I      intronic chr10:103903235(+) A-I      intronic chr10:103903245(+) A-I      intronic chr10:103909410(+) A-I      intronic chr10:103901960(+) A-I      intronic chr10:103896937(+) A-I      intronic chr10:103903236(+) A-I      intronic chr10:103895277(+) A-I      intronic chr10:103909474(+) A-I      intronic chr10:103909310(+) A-I      intronic chr10:103902275(+) A-I      intronic chr10:103902353(+) A-I      intronic chr10:103903120(+) A-I      intronic chr10:103905609(+) A-I      intronic chr10:103895774(+) A-I      intronic chr10:103894488(+) A-I      intronic chr10:103909323(+) A-I      intronic chr10:103895802(+) A-I      intronic chr10:103905358(+) A-I      intronic chr10:103894483(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PPRC1	chr10:103905358(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PPRC1	chr10:103892889-103892890(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr10:103892948-103892949(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:103897676-103897677(+) m6A CDS       24284625//24209618 chr10:103897682-103897683(+) m6A CDS       24284625//24209618 chr10:103897717-103897718(+) m6A CDS       24284625//24209618 chr10:103897729-103897730(+) m6A CDS       24284625//24209618 chr10:103898887-103898888(+) m6A CDS       24284625 chr10:103898913-103898914(+) m6A CDS       24284625 chr10:103898942-103898943(+) m6A CDS       24284625 chr10:103898957-103898958(+) m6A CDS       24284625 chr10:103899082-103899083(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr10:103899377-103899378(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899411-103899412(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899456-103899457(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899514-103899515(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899532-103899533(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899595-103899596(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899757-103899758(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899770-103899771(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899785-103899786(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103899880-103899881(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:103899899-103899900(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:103899931-103899932(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:103899963-103899964(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:103900124-103900125(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:103900331-103900332(+) m6A CDS       24284625//24981863//22575960//22608085 chr10:103900414-103900415(+) m6A CDS       24284625//24981863//22575960 chr10:103900425-103900426(+) m6A CDS       24284625//24981863//22575960 chr10:103900505-103900506(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr10:103900563-103900564(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103900617-103900618(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103900636-103900637(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103900677-103900678(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103900701-103900702(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103900775-103900776(+) m6A CDS       24284625//24209618//24981863//22575960 chr10:103900835-103900836(+) m6A CDS       24284625//24209618//22575960 chr10:103901412-103901413(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr10:103901465-103901466(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103901574-103901575(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103901583-103901584(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103902816-103902817(+) m6A CDS//exon       - chr10:103904057-103904058(+) m6A CDS//exon       24284625 chr10:103904076-103904077(+) m6A exon//intron       24284625 chr10:103904129-103904130(+) m6A exon//intron       24284625 chr10:103904811-103904812(+) m6A CDS//intron       24284625 chr10:103904830-103904831(+) m6A CDS//intron       24284625 chr10:103906532-103906533(+) m6A CDS//intron       24284625//24209618//24981863//22575960 chr10:103906564-103906565(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr10:103906632-103906633(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906658-103906659(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906731-103906732(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906744-103906745(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906820-103906821(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906911-103906912(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906919-103906920(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103906930-103906931(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:103907057-103907058(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr10:103908936-103908937(+) m6A CDS//exon       24284625 chr10:103909979-103909980(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	PPRC1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: PPRC1

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg