Basic Information:

  VIRBase ID:  

VHID00175319

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          H6PD:  NM_001282587     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	H6PD
miRBase Accession/Entrez ID	MIMAT0014353	9563
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CORTRD1//G6PDH//GDH//H6PDH

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	H6PD	chr1:9314363(+) A-I      intronic chr1:9328228(+) A-I      3'UTR chr1:9327064(+) A-I      3'UTR chr1:9314364(+) A-I      intronic chr1:9299508(+) A-I      intronic chr1:9328302(+) A-I      3'UTR chr1:9328250(+) A-I      3'UTR chr1:9328301(+) A-I      3'UTR chr1:9328280(+) A-I      3'UTR chr1:9328275(+) A-I      3'UTR chr1:9328268(+) A-I      3'UTR chr1:9314353(+) A-I      intronic chr1:9314335(+) A-I      intronic chr1:9299344(+) A-I      intronic chr1:9299341(+) A-I      intronic chr1:9296239(+) A-I      intronic chr1:9314355(+) A-I      intronic chr1:9296577(+) A-I      intronic chr1:9299327(+) A-I      intronic chr1:9299326(+) A-I      intronic chr1:9331105(+) A-I      3'UTR chr1:9331082(+) A-I      3'UTR chr1:9331080(+) A-I      3'UTR chr1:9331056(+) A-I      3'UTR chr1:9328313(+) A-I      3'UTR chr1:9320300(+) A-I      intronic chr1:9317273(+) A-I      intronic chr1:9295811(+) A-I      intronic chr1:9295809(+) A-I      intronic chr1:9296625(+) A-I      intronic chr1:9296628(+) A-I      intronic chr1:9296677(+) A-I      intronic chr1:9297361(+) A-I      intronic chr1:9299231(+) A-I      intronic chr1:9299245(+) A-I      intronic chr1:9314320(+) A-I      intronic chr1:9317268(+) A-I      intronic chr1:9317299(+) A-I      intronic chr1:9317302(+) A-I      intronic chr1:9296236(+) A-I      intronic chr1:9296487(+) A-I      intronic chr1:9296507(+) A-I      intronic chr1:9331044(+) A-I      3'UTR chr1:9325805(+) A-I      3'UTR chr1:9328137(+) A-I      3'UTR chr1:9331184(+) A-I      3'UTR chr1:9328116(+) A-I      3'UTR chr1:9327006(+) A-I      3'UTR chr1:9328038(+) A-I      3'UTR chr1:9327108(+) A-I      3'UTR chr1:9331178(+) A-I      3'UTR chr1:9331022(+) A-I      3'UTR chr1:9331020(+) A-I      3'UTR chr1:9326903(+) A-I      3'UTR chr1:9328321(+) A-I      3'UTR chr1:9331051(+) A-I      3'UTR chr1:9327131(+) A-I      3'UTR chr1:9328232(+) A-I      3'UTR chr1:9328318(+) A-I      3'UTR chr1:9328076(+) A-I      3'UTR chr1:9328282(+) A-I      3'UTR chr1:9328317(+) A-I      3'UTR chr1:9326942(+) A-I      3'UTR chr1:9328316(+) A-I      3'UTR chr1:9325787(+) A-I      3'UTR chr1:9328183(+) A-I      3'UTR chr1:9325773(+) A-I      3'UTR chr1:9327117(+) A-I      3'UTR chr1:9328315(+) A-I      3'UTR chr1:9328058(+) A-I      3'UTR chr1:9328314(+) A-I      3'UTR chr1:9328300(+) A-I      3'UTR chr1:9328286(+) A-I      3'UTR chr1:9328063(+) A-I      3'UTR chr1:9328278(+) A-I      3'UTR chr1:9328277(+) A-I      3'UTR chr1:9325762(+) A-I      3'UTR chr1:9328094(+) A-I      3'UTR chr1:9331267(+) A-I      3'UTR chr1:9328115(+) A-I      3'UTR chr1:9328239(+) A-I      3'UTR chr1:9331118(+) A-I      3'UTR chr1:9325738(+) A-I      3'UTR chr1:9327139(+) A-I      3'UTR chr1:9325736(+) A-I      3'UTR chr1:9331255(+) A-I      3'UTR chr1:9326979(+) A-I      3'UTR chr1:9327009(+) A-I      3'UTR chr1:9331173(+) A-I      3'UTR chr1:9328218(+) A-I      3'UTR chr1:9331113(+) A-I      3'UTR chr1:9331193(+) A-I      3'UTR chr1:9327079(+) A-I      3'UTR chr1:9331253(+) A-I      3'UTR chr1:9328143(+) A-I      3'UTR chr1:9327059(+) A-I      3'UTR chr1:9314293(+) A-I      intronic chr1:9296472(+) A-I      intronic chr1:9296716(+) A-I      intronic chr1:9296598(+) A-I      intronic chr1:9315575(+) A-I      intronic chr1:9295787(+) A-I      intronic chr1:9296517(+) A-I      intronic chr1:9295689(+) A-I      intronic chr1:9296620(+) A-I      intronic chr1:9297472(+) A-I      intronic chr1:9296187(+) A-I      intronic chr1:9326984(+) A-I      3'UTR chr1:9326959(+) A-I      3'UTR chr1:9326960(+) A-I      3'UTR chr1:9328102(+) A-I      3'UTR chr1:9328200(+) A-I      3'UTR chr1:9296556(+) A-I      intronic chr1:9314151(+) A-I      intronic chr1:9297391(+) A-I      intronic chr1:9331202(+) A-I      3'UTR chr1:9327088(+) A-I      3'UTR chr1:9327113(+) A-I      3'UTR chr1:9328087(+) A-I      3'UTR chr1:9296599(+) A-I      intronic chr1:9331075(+) A-I      3'UTR chr1:9328187(+) A-I      3'UTR chr1:9328082(+) A-I      3'UTR chr1:9315410(+) A-I      intronic chr1:9331227(+) A-I      3'UTR chr1:9297372(+) A-I      intronic chr1:9296515(+) A-I      intronic chr1:9297356(+) A-I      intronic chr1:9328120(+) A-I      3'UTR chr1:9328095(+) A-I      3'UTR chr1:9328106(+) A-I      3'UTR chr1:9314230(+) A-I      intronic chr1:9326954(+) A-I      3'UTR chr1:9315453(+) A-I      intronic chr1:9297466(+) A-I      intronic chr1:9325827(+) A-I      3'UTR chr1:9296551(+) A-I      intronic chr1:9328243(+) A-I      3'UTR chr1:9327068(+) A-I      3'UTR chr1:9327062(+) A-I      3'UTR chr1:9296560(+) A-I      intronic chr1:9314238(+) A-I      intronic chr1:9296104(+) A-I      intronic chr1:9325269(+) A-I      3'UTR chr1:9331254(+) A-I      3'UTR chr1:9296554(+) A-I      intronic chr1:9328131(+) A-I      3'UTR chr1:9328223(+) A-I      3'UTR chr1:9328103(+) A-I      3'UTR chr1:9314280(+) A-I      intronic chr1:9331081(+) A-I      3'UTR chr1:9328213(+) A-I      3'UTR chr1:9314200(+) A-I      intronic chr1:9296148(+) A-I      intronic chr1:9331176(+) A-I      3'UTR chr1:9325743(+) A-I      3'UTR chr1:9327141(+) A-I      3'UTR chr1:9296230(+) A-I      intronic chr1:9326957(+) A-I      3'UTR chr1:9328092(+) A-I      3'UTR chr1:9328027(+) A-I      3'UTR chr1:9331094(+) A-I      3'UTR chr1:9325774(+) A-I      3'UTR chr1:9314153(+) A-I      intronic chr1:9329605(+) A-I      3'UTR chr1:9331024(+) A-I      3'UTR chr1:9326997(+) A-I      3'UTR chr1:9331130(+) A-I      3'UTR chr1:9315524(+) A-I      intronic chr1:9295842(+) A-I      intronic chr1:9296329(+) A-I      intronic chr1:9328255(+) A-I      3'UTR chr1:9327153(+) A-I      3'UTR chr1:9296621(+) A-I      intronic chr1:9328047(+) A-I      3'UTR chr1:9325813(+) A-I      3'UTR chr1:9297409(+) A-I      intronic chr1:9296093(+) A-I      intronic chr1:9328242(+) A-I      3'UTR chr1:9299358(+) A-I      intronic chr1:9328074(+) A-I      3'UTR chr1:9325815(+) A-I      3'UTR chr1:9296669(+) A-I      intronic chr1:9296233(+) A-I      intronic chr1:9328207(+) A-I      3'UTR chr1:9331100(+) A-I      3'UTR chr1:9296099(+) A-I      intronic chr1:9325788(+) A-I      3'UTR chr1:9326983(+) A-I      3'UTR chr1:9328069(+) A-I      3'UTR chr1:9328052(+) A-I      3'UTR chr1:9296105(+) A-I      intronic chr1:9296160(+) A-I      intronic chr1:9314258(+) A-I      intronic chr1:9315593(+) A-I      intronic chr1:9327140(+) A-I      3'UTR chr1:9295723(+) A-I      intronic chr1:9296165(+) A-I      intronic chr1:9315434(+) A-I      intronic chr1:9328046(+) A-I      3'UTR chr1:9296520(+) A-I      intronic chr1:9296555(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	H6PD	chr1:9328069(+) A-I exon 3'UTR    15342557   //15258596 chr1:9328082(+) A-I exon 3'UTR    15258596 chr1:9328102(+) A-I exon 3'UTR    15342557   //15258596   //16100382   //21960545 chr1:9328106(+) A-I exon 3'UTR    15258596 chr1:9328120(+) A-I exon 3'UTR    15342557   //15258596 chr1:9328187(+) A-I exon 3'UTR    15258596 chr1:9328200(+) A-I exon 3'UTR    15342557   //15258596   //21960545 chr1:9328213(+) A-I exon 3'UTR    15342557   //15258596   //21960545 chr1:9328242(+) A-I exon 3'UTR    15342557   //15258596   //21960545 chr1:9328243(+) A-I exon 3'UTR    15342557   //15258596   //21960545 chr1:9329605(+) A-I exon 3'UTR    19478186 chr1:9295787(+) A-I intron -    22327324 chr1:9326957(+) A-I intron -    21960545   //22327324 chr1:9328223(+) A-I intron -    22327324 chr1:9296230(+) A-I intron -    21960545 chr1:9296233(+) A-I intron -    21960545 chr1:9296329(+) A-I intron -    21960545 chr1:9326960(+) A-I intron -    21960545 chr1:9328103(+) A-I intron -    21960545 chr1:9328027(+) A-I intron -    21960545 chr1:9328046(+) A-I intron -    21960545 chr1:9328074(+) A-I intron -    21960545 chr1:9331094(+) A-I intron -    21960545 chr1:9331101(+) A-I intron -    21960545 chr1:9328242(+) A-G intron -    21725310   //22484847 chr1:9295723(+) A-G intron -    22484847 chr1:9295787(+) A-G intron -    22484847 chr1:9296105(+) A-G intron -    22484847 chr1:9296148(+) A-G intron -    22484847 chr1:9296160(+) A-G intron -    22484847 chr1:9296165(+) A-G intron -    22484847 chr1:9296187(+) A-G intron -    22484847 chr1:9296230(+) A-G intron -    22484847 chr1:9296233(+) A-G intron -    22484847 chr1:9296472(+) A-G intron -    22484847 chr1:9296515(+) A-G intron -    22484847 chr1:9296520(+) A-G intron -    22484847 chr1:9296554(+) A-G intron -    22484847 chr1:9296555(+) A-G intron -    22484847 chr1:9296556(+) A-G intron -    22484847 chr1:9296560(+) A-G intron -    22484847 chr1:9296620(+) A-G intron -    22484847 chr1:9296621(+) A-G intron -    22484847 chr1:9315453(+) A-G intron -    22484847 chr1:9326957(+) A-G intron -    22484847 chr1:9326997(+) A-G intron -    22484847 chr1:9328046(+) A-G intron -    22484847 chr1:9328092(+) A-G intron -    22484847 chr1:9328102(+) A-G intron -    22484847 chr1:9328103(+) A-G intron -    22484847 chr1:9328120(+) A-G intron -    22484847 chr1:9328213(+) A-G intron -    22484847 chr1:9328223(+) A-G intron -    22484847 chr1:9328243(+) A-G intron -    22484847 chr1:9331075(+) A-G intron -    22484847 chr1:9331094(+) A-G intron -    22484847 chr1:9331130(+) A-G intron -    22484847 chr1:9328027(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	H6PD	chr1:9305064-9305065(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9305099-9305100(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9305127-9305128(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9305258-9305259(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9305339-9305340(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9305354-9305355(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9305360-9305361(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9305444-9305445(+) m6A CDS       24284625//25456834//24981863//22608085 chr1:9305514-9305515(+) m6A CDS       24284625//24981863 chr1:9305559-9305560(+) m6A CDS       24284625//24981863 chr1:9305566-9305567(+) m6A CDS       24284625//24981863 chr1:9305600-9305601(+) m6A CDS       24284625//24981863 chr1:9307052-9307053(+) m6A CDS       24284625//24981863 chr1:9307058-9307059(+) m6A CDS       24284625 chr1:9307085-9307086(+) m6A CDS       24284625 chr1:9307126-9307127(+) m6A CDS       - chr1:9322354-9322355(+) m6A CDS       - chr1:9323675-9323676(+) m6A CDS       24284625//25456834//24981863 chr1:9323801-9323802(+) m6A CDS       24284625//25456834//24981863//22575960 chr1:9323847-9323848(+) m6A CDS       24284625//24209618//24981863//22575960 chr1:9323984-9323985(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9324002-9324003(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9324010-9324011(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:9324086-9324087(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9324434-9324435(+) m6A CDS       24284625//24981863 chr1:9324551-9324552(+) m6A CDS       24284625//24981863 chr1:9324905-9324906(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr1:9325033-9325034(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:9325070-9325071(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:9325130-9325131(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:9325199-9325200(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr1:9325253-9325254(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:9325334-9325335(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:9325349-9325350(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:9325371-9325372(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:9325433-9325434(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:9325444-9325445(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:9325493-9325494(+) m6A 3'UTR       24284625//24981863 chr1:9325625-9325626(+) m6A 3'UTR//exon       24284625 chr1:9326381-9326382(+) m6A 3'UTR//exon       - chr1:9326395-9326396(+) m6A 3'UTR//exon       24981863 chr1:9326440-9326441(+) m6A 3'UTR//exon       24981863 chr1:9326521-9326522(+) m6A 3'UTR//exon       24284625//24981863 chr1:9326545-9326546(+) m6A 3'UTR//exon       24284625//24981863 chr1:9326598-9326599(+) m6A 3'UTR//exon       24284625 chr1:9326673-9326674(+) m6A 3'UTR//exon       24284625//24981863 chr1:9326742-9326743(+) m6A 3'UTR//exon       24981863 chr1:9326808-9326809(+) m6A 3'UTR//exon       24981863 chr1:9327181-9327182(+) m6A 3'UTR//exon       24284625//24981863 chr1:9327219-9327220(+) m6A 3'UTR//exon       24284625//24981863 chr1:9327224-9327225(+) m6A 3'UTR//exon       24284625//24981863 chr1:9327307-9327308(+) m6A 3'UTR//exon       24284625 chr1:9327473-9327474(+) m6A 3'UTR//exon       24284625 chr1:9327747-9327748(+) m6A 3'UTR//exon       24284625 chr1:9327824-9327825(+) m6A 3'UTR//exon       24284625 chr1:9327848-9327849(+) m6A 3'UTR//exon       24284625 chr1:9327855-9327856(+) m6A 3'UTR//exon       24284625 chr1:9328558-9328559(+) m6A 3'UTR//intron       24981863 chr1:9328623-9328624(+) m6A 3'UTR//intron       24981863 chr1:9328915-9328916(+) m6A 3'UTR//intron       24284625//24981863 chr1:9328947-9328948(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:9328989-9328990(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:9329088-9329089(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:9329116-9329117(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:9329213-9329214(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9329227-9329228(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9329258-9329259(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9329316-9329317(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:9329754-9329755(+) m6A 3'UTR//intron       24284625//24981863 chr1:9329760-9329761(+) m6A 3'UTR//intron       24284625//24981863 chr1:9329856-9329857(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr1:9329910-9329911(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr1:9330257-9330258(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr1:9330327-9330328(+) m6A 3'UTR//intron       24981863 chr1:9330366-9330367(+) m6A 3'UTR//intron       24981863 chr1:9330401-9330402(+) m6A 3'UTR//intron       24981863 chr1:9330504-9330505(+) m6A 3'UTR//intron       24981863 chr1:9330531-9330532(+) m6A 3'UTR//intron       24981863 chr1:9330682-9330683(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr1:9330741-9330742(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:9330802-9330803(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:9330841-9330842(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:9330928-9330929(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:9330949-9330950(+) m6A 3'UTR//intron       24209618//25456834//24981863//22608085 chr1:9330958-9330959(+) m6A 3'UTR//intron       24209618//25456834//24981863//22608085 chr1:9330998-9330999(+) m6A 3'UTR//intron       24209618//24981863 chr1:9331021-9331022(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	H6PD	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: H6PD

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg