Basic Information:

  VIRBase ID:  

VHID00175023

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          TNNI1:  NM_003281     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	TNNI1
miRBase Accession/Entrez ID	MIMAT0014353	7135
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SSTNI//TNN1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TNNI1	chr1:201374410(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TNNI1	chr1:201374410(-) A-I exon 3'UTR    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TNNI1	chr1:201374535-201374536(-) m6A 3'UTR       25456834 chr1:201374589-201374590(-) m6A 3'UTR       25456834 chr1:201374602-201374603(-) m6A 3'UTR       25456834 chr1:201374724-201374725(-) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	TNNI1	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: TNNI1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg