Basic Information:

  VIRBase ID:  

VHID00174963

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          SUOX:  NM_000456     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	SUOX
miRBase Accession/Entrez ID	MIMAT0014353	6821
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SUOX	chr12:56392758(+) A-I      intronic chr12:56397234(+) A-I      intronic chr12:56397185(+) A-I      intronic chr12:56397175(+) A-I      intronic chr12:56397146(+) A-I      intronic chr12:56397123(+) A-I      intronic chr12:56397115(+) A-I      intronic chr12:56393052(+) A-I      intronic chr12:56393006(+) A-I      intronic chr12:56392512(+) A-I      intronic chr12:56392224(+) A-I      intronic chr12:56392859(+) A-I      intronic chr12:56392726(+) A-I      intronic chr12:56392652(+) A-I      intronic chr12:56392123(+) A-I      intronic chr12:56392434(+) A-I      intronic chr12:56395054(+) A-I      intronic chr12:56392148(+) A-I      intronic chr12:56392795(+) A-I      intronic chr12:56392736(+) A-I      intronic chr12:56392479(+) A-I      intronic chr12:56392662(+) A-I      intronic chr12:56392131(+) A-I      intronic chr12:56392379(+) A-I      intronic chr12:56392536(+) A-I      intronic chr12:56392607(+) A-I      intronic chr12:56392463(+) A-I      intronic chr12:56392104(+) A-I      intronic chr12:56392438(+) A-I      intronic chr12:56392683(+) A-I      intronic chr12:56392200(+) A-I      intronic chr12:56395170(+) A-I      intronic chr12:56393015(+) A-I      intronic chr12:56392781(+) A-I      intronic chr12:56392731(+) A-I      intronic chr12:56392987(+) A-I      intronic chr12:56392151(+) A-I      intronic chr12:56393023(+) A-I      intronic chr12:56392233(+) A-I      intronic chr12:56392798(+) A-I      intronic chr12:56392545(+) A-I      intronic chr12:56393010(+) A-I      intronic chr12:56392202(+) A-I      intronic chr12:56397306(+) A-I      intronic chr12:56393064(+) A-I      intronic chr12:56392110(+) A-I      intronic chr12:56392175(+) A-I      intronic chr12:56392467(+) A-I      intronic chr12:56392315(+) A-I      intronic chr12:56392653(+) A-I      intronic chr12:56392808(+) A-I      intronic chr12:56392419(+) A-I      intronic chr12:56392861(+) A-I      intronic chr12:56392860(+) A-I      intronic chr12:56392374(+) A-I      intronic chr12:56392511(+) A-I      intronic chr12:56397255(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SUOX	chr12:56393023(+) A-I intron -    22327324 chr12:56392200(+) A-I intron -    21960545 chr12:56392463(+) A-I intron -    21960545 chr12:56392652(+) A-I intron -    21960545 chr12:56392662(+) A-I intron -    21960545 chr12:56392652(+) A-G intron -    22484847 chr12:56392798(+) A-G intron -    22484847 chr12:56392861(+) A-G intron -    22484847 chr12:56393023(+) A-G intron -    22484847 chr12:56396577(+) A-G intron -    22484847 chr12:56396684(+) A-G intron -    22484847 chr12:56392463(+) A-G intron -    22484847 chr12:56392607(+) A-G intron -    22484847 chr12:56392662(+) A-G intron -    22484847 chr12:56392808(+) A-G intron -    22484847 chr12:56392860(+) A-G intron -    22484847 chr12:56393010(+) A-G intron -    22484847 chr12:56396643(+) A-G intron -    22484847 chr12:56396730(+) A-G intron -    22484847 chr12:56397255(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SUOX	chr12:56391040-56391041(+) m6A 5'UTR       24981863 chr12:56391073-56391074(+) m6A 5'UTR//exon       24284625//24981863 chr12:56391111-56391112(+) m6A 5'UTR//exon       24284625//24981863 chr12:56391118-56391119(+) m6A 5'UTR//exon       24284625//24981863 chr12:56391131-56391132(+) m6A 5'UTR//intron       24284625//24981863 chr12:56396533-56396534(+) m6A exon//intron       22608085 chr12:56396806-56396807(+) m6A exon//intron       25456834//24981863//22608085 chr12:56397464-56397465(+) m6A CDS//exon//intron       24284625//25456834//24981863//22608085 chr12:56397519-56397520(+) m6A CDS//exon//intron       24284625//25456834//24981863//22608085 chr12:56397663-56397664(+) m6A CDS//exon//intron       24284625//24981863 chr12:56397686-56397687(+) m6A CDS//exon//intron       24284625//24981863 chr12:56397789-56397790(+) m6A CDS//exon//intron       24284625//24981863//22608085 chr12:56397825-56397826(+) m6A CDS//exon//intron       24284625//24981863//22608085 chr12:56397855-56397856(+) m6A CDS//intron       24284625//24981863//22608085 chr12:56398025-56398026(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398106-56398107(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398132-56398133(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398137-56398138(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398143-56398144(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398154-56398155(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398194-56398195(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398395-56398396(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398403-56398404(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398438-56398439(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398481-56398482(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398609-56398610(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:56398672-56398673(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398681-56398682(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398686-56398687(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:56398731-56398732(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr12:56398752-56398753(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr12:56398958-56398959(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr12:56398973-56398974(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr12:56399005-56399006(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr12:56399069-56399070(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr12:56399081-56399082(+) Y 3'UTR//intron       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	SUOX	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: SUOX

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg