Basic Information:

  VIRBase ID:  

VHID00174923

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          SIGLEC1:  NM_023068     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	SIGLEC1
miRBase Accession/Entrez ID	MIMAT0014353	6614
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD169//SIGLEC-1//SN

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SIGLEC1	chr20:3680380(-) A-I      intronic chr20:3671657(-) A-I      intronic chr20:3671616(-) A-I      intronic chr20:3671615(-) A-I      intronic chr20:3680590(-) A-I      intronic chr20:3680389(-) A-I      intronic chr20:3671622(-) A-I      intronic chr20:3680727(-) A-I      intronic chr20:3681463(-) A-I      intronic chr20:3681464(-) A-I      intronic chr20:3681613(-) A-I      intronic chr20:3680862(-) A-I      intronic chr20:3680876(-) A-I      intronic chr20:3680890(-) A-I      intronic chr20:3681148(-) A-I      intronic chr20:3681149(-) A-I      intronic chr20:3681174(-) A-I      intronic chr20:3681445(-) A-I      intronic chr20:3680596(-) A-I      intronic chr20:3681444(-) A-I      intronic chr20:3680728(-) A-I      intronic chr20:3680794(-) A-I      intronic chr20:3680812(-) A-I      intronic chr20:3680379(-) A-I      intronic chr20:3680456(-) A-I      intronic chr20:3680367(-) A-I      intronic chr20:3680861(-) A-I      intronic chr20:3681114(-) A-I      intronic chr20:3680595(-) A-I      intronic chr20:3681225(-) A-I      intronic chr20:3680372(-) A-I      intronic chr20:3680405(-) A-I      intronic chr20:3681131(-) A-I      intronic chr20:3680620(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SIGLEC1	chr20:3667634-3667635(-) m6A 3'UTR       - chr20:3667674-3667675(-) m6A 3'UTR       - chr20:3667741-3667742(-) m6A 3'UTR       27371828 chr20:3667806-3667807(-) m6A 3'UTR       27371828 chr20:3667910-3667911(-) m6A 3'UTR       27371828 chr20:3667977-3667978(-) m6A 3'UTR       - chr20:3668060-3668061(-) m6A 3'UTR       - chr20:3668102-3668103(-) m6A 3'UTR       - chr20:3668177-3668178(-) m6A 3'UTR       - chr20:3668249-3668250(-) m6A 3'UTR       - chr20:3668381-3668382(-) m6A 3'UTR       27371828 chr20:3668408-3668409(-) m6A 3'UTR       27371828 chr20:3668419-3668420(-) m6A 3'UTR       27371828 chr20:3668433-3668434(-) m6A 3'UTR       27371828 chr20:3668468-3668469(-) m6A 3'UTR       27371828 chr20:3668532-3668533(-) m6A 3'UTR       - chr20:3668876-3668877(-) m6A 3'UTR       27371828 chr20:3668995-3668996(-) m6A 3'UTR       27371828 chr20:3669098-3669099(-) m6A 3'UTR       - chr20:3669538-3669539(-) m6A 3'UTR//intron       - chr20:3669566-3669567(-) m6A 3'UTR//intron       - chr20:3669575-3669576(-) m6A 3'UTR//intron       - chr20:3669585-3669586(-) m6A 3'UTR//intron       - chr20:3669670-3669671(-) m6A 3'UTR//intron       - chr20:3669702-3669703(-) m6A 3'UTR//intron       - chr20:3672192-3672193(-) m6A CDS       - chr20:3675100-3675101(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	SIGLEC1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: SIGLEC1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg