Basic Information:

  VIRBase ID:  

VHID00174730

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          PIGR:  NM_002644     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	PIGR
miRBase Accession/Entrez ID	MIMAT0014353	5284
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PIGR	chr1:207102531(-) A-I      3'UTR chr1:207102527(-) A-I      3'UTR chr1:207102506(-) A-I      3'UTR chr1:207102505(-) A-I      3'UTR chr1:207102488(-) A-I      3'UTR chr1:207102386(-) A-I      3'UTR chr1:207102334(-) A-I      3'UTR chr1:207102344(-) A-I      3'UTR chr1:207102373(-) A-I      3'UTR chr1:207102542(-) A-I      3'UTR chr1:207102544(-) A-I      3'UTR chr1:207102554(-) A-I      3'UTR chr1:207102512(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PIGR	chr1:207102439(-) A-T exon 3'UTR    22484847 chr1:207102573(-) C-T exon 3'UTR    22484847

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	PIGR	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: PIGR

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg