Basic Information:

  VIRBase ID:  

VHID00174369

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          SFN:  NM_006142     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	SFN
miRBase Accession/Entrez ID	MIMAT0014353	2810
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	YWHAS

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SFN	chr1:27189637-27189638(+) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27189764-27189765(+) m6A CDS       24284625//24209618//24981863//26404942//22575960 chr1:27189827-27189828(+) m6A CDS       24284625//24209618//24981863//26404942//22575960 chr1:27189970-27189971(+) m6A CDS       24284625//24209618//24981863//26404942//22575960 chr1:27189988-27189989(+) Tm CDS       - chr1:27190013-27190014(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190169-27190170(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190226-27190227(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190288-27190289(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190334-27190335(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190346-27190347(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190376-27190377(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190506-27190507(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190580-27190581(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190702-27190703(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190793-27190794(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960 chr1:27190798-27190799(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr1:27190874-27190875(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	SFN	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: SFN

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg