Basic Information:

  VIRBase ID:  

VHID00174333

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          GATA2:  NM_001145662     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	GATA2
miRBase Accession/Entrez ID	MIMAT0014353	2624
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DCML//IMD21//MONOMAC//NFE1B

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GATA2	chr3:128198715-128198716(-) m6A 3'UTR       24284625 chr3:128198721-128198722(-) m6A 3'UTR       24284625 chr3:128199024-128199025(-) m6A 3'UTR//exon       24284625//27773535 chr3:128199083-128199084(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr3:128199200-128199201(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199257-128199258(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199351-128199352(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199402-128199403(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr3:128199492-128199493(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22575960//22608085 chr3:128199500-128199501(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22575960//22608085 chr3:128199577-128199578(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr3:128199609-128199610(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199618-128199619(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199633-128199634(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199811-128199812(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199816-128199817(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199840-128199841(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199857-128199858(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199954-128199955(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128199999-128200000(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:128200097-128200098(-) Am CDS//exon       - chr3:128200114-128200115(-) m6A CDS//exon       24284625//24981863//27773535//22575960 chr3:128200121-128200122(-) m6A CDS//exon       24284625//24981863//27773535//22575960 chr3:128200704-128200705(-) m6A CDS//exon       24284625//27773535 chr3:128204621-128204622(-) m6A CDS       24284625 chr3:128204651-128204652(-) m6A CDS       24284625 chr3:128204820-128204821(-) m6A CDS       24284625//27773535 chr3:128205091-128205092(-) m6A CDS       24284625 chr3:128205769-128205770(-) m6A CDS       24284625 chr3:128205896-128205897(-) m6A 5'UTR       24284625 chr3:128206602-128206603(-) m6A 5'UTR//intron       24284625 chr3:128207226-128207227(-) m6A 5'UTR//intron       24284625 chr3:128207252-128207253(-) m6A 5'UTR//intron       24284625 chr3:128209370-128209371(-) m6A 5'UTR//intron       24284625 chr3:128210850-128210851(-) m6A 5'UTR//intron       24284625//24981863 chr3:128210925-128210926(-) m6A 5'UTR//intron       24981863 chr3:128210978-128210979(-) m6A 5'UTR//intron       24981863 chr3:128211012-128211013(-) m6A 5'UTR//intron       24981863 chr3:128211058-128211059(-) m6A 5'UTR//intron       - chr3:128211899-128211900(-) m6A 5'UTR       - chr3:128211917-128211918(-) m6A 5'UTR       - chr3:128211989-128211990(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	GATA2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: GATA2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg