Basic Information:

  VIRBase ID:  

VHID00174298

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          FOXF1:  NM_001451     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	FOXF1
miRBase Accession/Entrez ID	MIMAT0014353	2294
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACDMPV//FKHL5//FREAC1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FOXF1	chr16:86544254-86544255(+) m6A CDS       24284625 chr16:86544289-86544290(+) m6A CDS       24284625 chr16:86544455-86544456(+) m6A CDS       24284625//22608085 chr16:86544541-86544542(+) m6A CDS       24284625//22575960//22608085 chr16:86544677-86544678(+) m6A CDS       24284625//24209618//22575960//22608085 chr16:86545124-86545125(+) m6A CDS       24284625 chr16:86546668-86546669(+) m6A CDS       24284625//22608085 chr16:86546737-86546738(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:86546744-86546745(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:86546757-86546758(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:86546850-86546851(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:86546966-86546967(+) m6A 3'UTR       24284625//24981863//22608085 chr16:86547086-86547087(+) m6A 3'UTR       24284625 chr16:86547095-86547096(+) m6A 3'UTR       24284625 chr16:86547285-86547286(+) m6A 3'UTR       24284625//24981863//22608085 chr16:86547308-86547309(+) m6A 3'UTR       24284625//24981863//22608085 chr16:86547344-86547345(+) m6A 3'UTR       24284625//24981863//22608085 chr16:86547468-86547469(+) m6A 3'UTR       24284625//22608085 chr16:86547512-86547513(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chr16:86547537-86547538(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chr16:86547555-86547556(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:86547625-86547626(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:86547678-86547679(+) m6A 3'UTR       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	FOXF1	Cytoplasm Lung fibroblasts     25630241 Exosome Blood     - Nucleus Lung fibroblasts     25630241 Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: FOXF1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg