Basic Information:

  VIRBase ID:  

VHID00174086

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H10:  MIMAT0014353          CENPB:  NM_001810     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H10	CENPB
miRBase Accession/Entrez ID	MIMAT0014353	1059
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CENPB	chr20:3764933-3764934(-) m6A 3'UTR       24284625//24981863//26404942//27773536//22575960//22608085 chr20:3765028-3765029(-) m6A 3'UTR       24284625//25456834//24981863//28052920//26404942//22575960//22608085 chr20:3765083-3765084(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr20:3765271-3765272(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr20:3765321-3765322(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr20:3765342-3765343(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr20:3765376-3765377(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr20:3765405-3765406(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr20:3765591-3765592(-) Cm CDS       - chr20:3765592-3765593(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr20:3765604-3765605(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr20:3765706-3765707(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr20:3765754-3765755(-) m1A CDS       26863196//26863410 chr20:3765889-3765890(-) m1A CDS       26863196//26863410 chr20:3765994-3765995(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:3766216-3766217(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr20:3766285-3766286(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr20:3766541-3766542(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085 chr20:3766759-3766760(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085 chr20:3766928-3766929(-) m6A CDS       24284625//27371828//27773536//22575960//22608085 chr20:3766987-3766988(-) m6A CDS       24284625//26404942//27773535//27371828//27773536//22575960 chr20:3767056-3767057(-) m6A CDS       24284625//24209618//26404942//27773535//27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H10	Exosome K562 cells     24460325
	CENPB	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H10
Interactor2: CENPB

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg