Basic Information:

  VIRBase ID:  

VHID00173555

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          TFAP2E:  NM_178548     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	TFAP2E
miRBase Accession/Entrez ID	MIMAT0014352	339488
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AP2E

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TFAP2E	chr1:36044836(+) A-I      intronic chr1:36044835(+) A-I      intronic chr1:36044847(+) A-I      intronic chr1:36048925(+) A-I      intronic chr1:36044886(+) A-I      intronic chr1:36044870(+) A-I      intronic chr1:36057835(+) A-I      intronic chr1:36044846(+) A-I      intronic chr1:36045121(+) A-I      intronic chr1:36044844(+) A-I      intronic chr1:36048967(+) A-I      intronic chr1:36044841(+) A-I      intronic chr1:36044839(+) A-I      intronic chr1:36044837(+) A-I      intronic chr1:36047580(+) A-I      intronic chr1:36045579(+) A-I      intronic chr1:36045536(+) A-I      intronic chr1:36045196(+) A-I      intronic chr1:36045668(+) A-I      intronic chr1:36045193(+) A-I      intronic chr1:36045170(+) A-I      intronic chr1:36044782(+) A-I      intronic chr1:36045162(+) A-I      intronic chr1:36046261(+) A-I      intronic chr1:36045157(+) A-I      intronic chr1:36045141(+) A-I      intronic chr1:36045135(+) A-I      intronic chr1:36045125(+) A-I      intronic chr1:36045036(+) A-I      intronic chr1:36044946(+) A-I      intronic chr1:36048928(+) A-I      intronic chr1:36046386(+) A-I      intronic chr1:36047303(+) A-I      intronic chr1:36047353(+) A-I      intronic chr1:36047378(+) A-I      intronic chr1:36047496(+) A-I      intronic chr1:36057639(+) A-I      intronic chr1:36047606(+) A-I      intronic chr1:36047610(+) A-I      intronic chr1:36044877(+) A-I      intronic chr1:36048316(+) A-I      intronic chr1:36048330(+) A-I      intronic chr1:36048361(+) A-I      intronic chr1:36048945(+) A-I      intronic chr1:36048965(+) A-I      intronic chr1:36048966(+) A-I      intronic chr1:36048980(+) A-I      intronic chr1:36048981(+) A-I      intronic chr1:36048988(+) A-I      intronic chr1:36049005(+) A-I      intronic chr1:36051448(+) A-I      intronic chr1:36051464(+) A-I      intronic chr1:36051570(+) A-I      intronic chr1:36051634(+) A-I      intronic chr1:36057343(+) A-I      intronic chr1:36057351(+) A-I      intronic chr1:36057352(+) A-I      intronic chr1:36057611(+) A-I      intronic chr1:36044882(+) A-I      intronic chr1:36057743(+) A-I      intronic chr1:36057765(+) A-I      intronic chr1:36057800(+) A-I      intronic chr1:36057801(+) A-I      intronic chr1:36044876(+) A-I      intronic chr1:36044850(+) A-I      intronic chr1:36043921(+) A-I      intronic chr1:36043941(+) A-I      intronic chr1:36044421(+) A-I      intronic chr1:36044429(+) A-I      intronic chr1:36044475(+) A-I      intronic chr1:36044488(+) A-I      intronic chr1:36044498(+) A-I      intronic chr1:36045074(+) A-I      intronic chr1:36044577(+) A-I      intronic chr1:36044513(+) A-I      intronic chr1:36045161(+) A-I      intronic chr1:36044564(+) A-I      intronic chr1:36045624(+) A-I      intronic chr1:36043914(+) A-I      intronic chr1:36043908(+) A-I      intronic chr1:36043890(+) A-I      intronic chr1:36057806(+) A-I      intronic chr1:36057830(+) A-I      intronic chr1:36057831(+) A-I      intronic chr1:36058674(+) A-I      intronic chr1:36058736(+) A-I      intronic chr1:36045690(+) A-I      intronic chr1:36045696(+) A-I      intronic chr1:36045826(+) A-I      intronic chr1:36051637(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TFAP2E	chr1:36038995-36038996(+) m6A 5'UTR       - chr1:36039023-36039024(+) m6A 5'UTR       - chr1:36060167-36060168(+) m6A CDS       - chr1:36060197-36060198(+) m6A CDS       - chr1:36060238-36060239(+) m6A CDS       - chr1:36060326-36060327(+) m6A 3'UTR       25456834 chr1:36060355-36060356(+) m6A 3'UTR       25456834 chr1:36060391-36060392(+) m6A 3'UTR       25456834 chr1:36060538-36060539(+) m6A 3'UTR       27773535 chr1:36060756-36060757(+) m6A 3'UTR       - chr1:36060812-36060813(+) m6A 3'UTR       - chr1:36060840-36060841(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TFAP2E	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: TFAP2E

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg