Basic Information:

  VIRBase ID:  

VHID00173478

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          ZSCAN1:  NM_182572     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	ZSCAN1
miRBase Accession/Entrez ID	MIMAT0014352	284312
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MZF-1//ZNF915

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZSCAN1	chr19:58560154(+) A-I      intronic chr19:58553048(+) A-I      intronic chr19:58553129(+) A-I      intronic chr19:58562161(+) A-I      intronic chr19:58553188(+) A-I      intronic chr19:58564617(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZSCAN1	chr19:58557007(+) A-I intron -    22327324 chr19:58557017(+) A-I intron -    22327324 chr19:58557046(+) A-I intron -    22327324 chr19:58557217(+) A-I intron -    22327324 chr19:58557621(+) A-I intron -    22327324

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZSCAN1	chr19:58549152-58549153(+) m6A 5'UTR       25456834 chr19:58549249-58549250(+) m6A CDS       25456834 chr19:58549489-58549490(+) m6A CDS       25456834 chr19:58549547-58549548(+) m6A CDS       25456834//24981863 chr19:58549631-58549632(+) m6A CDS//intron       25456834//24981863 chr19:58549636-58549637(+) m6A CDS//intron       25456834//24981863 chr19:58549695-58549696(+) m6A CDS//intron       25456834 chr19:58556642-58556643(+) m6A intron       25456834 chr19:58557682-58557683(+) Gm intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZSCAN1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: ZSCAN1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg