Detail Information

Basic Information:


  VIRBase ID:  

VHID00173239

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:           DENND2C:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H9-3p DENND2C
miRBase
Accession/Entrez ID		 MIMAT0014352 163259
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - dJ1156J9.1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DENND2C
chr1:115129720(-) A-I      ncRNA
chr1:115207774(-) A-I      intronic
chr1:115127074(-) A-I      3'UTR
chr1:115191604(-) A-I      intronic
chr1:115156785(-) A-I      intronic
chr1:115156791(-) A-I      intronic
chr1:115127092(-) A-I      3'UTR
chr1:115127161(-) A-I      3'UTR
chr1:115127164(-) A-I      3'UTR
chr1:115156741(-) A-I      intronic
chr1:115127170(-) A-I      3'UTR
chr1:115127060(-) A-I      3'UTR
chr1:115127061(-) A-I      3'UTR
chr1:115127071(-) A-I      3'UTR
chr1:115127073(-) A-I      3'UTR
chr1:115127091(-) A-I      3'UTR
chr1:115160109(-) A-I      intronic
chr1:115160114(-) A-I      intronic
chr1:115160130(-) A-I      intronic
chr1:115195933(-) A-I      intronic
chr1:115127093(-) A-I      3'UTR
chr1:115156784(-) A-I      intronic
chr1:115127110(-) A-I      3'UTR
chr1:115156758(-) A-I      intronic
chr1:115127113(-) A-I      3'UTR
chr1:115155040(-) A-I      intronic
chr1:115155058(-) A-I      intronic
chr1:115155075(-) A-I      intronic
chr1:115159419(-) A-I      intronic
chr1:115159437(-) A-I      intronic
chr1:115167166(-) A-I      intronic
chr1:115167175(-) A-I      intronic
chr1:115172731(-) A-I      intronic
chr1:115172742(-) A-I      intronic
chr1:115136342(-) A-I      intronic
chr1:115177007(-) A-I      intronic
chr1:115181942(-) A-I      intronic
chr1:115182120(-) A-I      intronic
chr1:115182121(-) A-I      intronic
chr1:115182172(-) A-I      intronic
chr1:115189576(-) A-I      intronic
chr1:115190606(-) A-I      intronic
chr1:115190608(-) A-I      intronic
chr1:115132812(-) A-I      intronic
chr1:115190611(-) A-I      intronic
chr1:115191628(-) A-I      intronic
chr1:115191638(-) A-I      intronic
chr1:115191643(-) A-I      intronic
chr1:115191827(-) A-I      intronic
chr1:115192117(-) A-I      intronic
chr1:115192881(-) A-I      intronic
chr1:115195840(-) A-I      intronic
chr1:115195867(-) A-I      intronic
chr1:115196009(-) A-I      intronic
chr1:115196864(-) A-I      intronic
chr1:115196869(-) A-I      intronic
chr1:115196872(-) A-I      intronic
chr1:115196889(-) A-I      intronic
chr1:115196990(-) A-I      intronic
chr1:115199614(-) A-I      intronic
chr1:115207304(-) A-I      intronic
chr1:115207639(-) A-I      intronic
chr1:115207838(-) A-I      intronic
chr1:115207854(-) A-I      intronic
chr1:115207856(-) A-I      intronic
chr1:115127502(-) A-I      3'UTR
chr1:115127185(-) A-I      3'UTR
chr1:115127129(-) A-I      3'UTR
chr1:115127124(-) A-I      3'UTR
chr1:115126998(-) A-I      3'UTR
chr1:115126985(-) A-I      3'UTR
chr1:115126978(-) A-I      3'UTR
chr1:115126903(-) A-I      3'UTR
chr1:115126371(-) A-I      3'UTR
chr1:115126198(-) A-I      3'UTR
chr1:115189546(-) A-I      intronic
chr1:115129713(-) A-I      ncRNA
chr1:115138930(-) A-I      intronic
chr1:115206977(-) A-I      intronic
chr1:115190517(-) A-I      intronic
chr1:115127158(-) A-I      3'UTR
chr1:115127057(-) A-I      3'UTR
chr1:115127041(-) A-I      3'UTR
chr1:115198894(-) A-I      intronic
chr1:115160111(-) A-I      intronic
chr1:115153258(-) A-I      intronic
chr1:115127115(-) A-I      3'UTR
chr1:115126165(-) A-I      3'UTR
chr1:115190060(-) A-I      intronic
chr1:115126216(-) A-I      3'UTR
chr1:115129687(-) A-I      ncRNA
chr1:115155113(-) A-I      intronic
chr1:115179960(-) A-I      intronic
chr1:115198142(-) A-I      intronic
chr1:115127142(-) A-I      3'UTR
chr1:115153136(-) A-I      intronic
chr1:115179840(-) A-I      intronic
chr1:115176968(-) A-I      intronic
chr1:115189736(-) A-I      intronic
chr1:115126184(-) A-I      3'UTR
chr1:115195925(-) A-I      intronic
chr1:115127101(-) A-I      3'UTR
chr1:115126266(-) A-I      3'UTR
chr1:115126306(-) A-I      3'UTR
chr1:115191855(-) A-I      intronic
chr1:115127147(-) A-I      3'UTR
chr1:115127496(-) A-I      3'UTR
chr1:115136188(-) A-I      intronic
chr1:115138737(-) A-I      intronic
chr1:115136240(-) A-I      intronic
chr1:115169419(-) A-I      intronic
chr1:115126958(-) A-I      3'UTR
chr1:115179949(-) A-I      intronic
chr1:115126171(-) A-I      3'UTR
chr1:115192069(-) A-I      intronic
chr1:115195868(-) A-I      intronic
chr1:115126248(-) A-I      3'UTR
chr1:115172895(-) A-I      intronic
chr1:115190544(-) A-I      intronic
chr1:115159393(-) A-I      intronic
chr1:115127169(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DENND2C
chr1:115160111(-) A-G intron -    22484847
chr1:115172895(-) A-G intron -    22484847
chr1:115191855(-) A-G intron -    22484847
chr1:115192069(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DENND2C
chr1:115167840-115167841(-) m6A CDS//exon       22608085
chr1:115167846-115167847(-) m6A CDS//exon       27773535//22608085
chr1:115167910-115167911(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr1:115167959-115167960(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:115167969-115167970(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:115167993-115167994(-) m6A CDS       24284625//25456834//24981863//22608085
chr1:115168014-115168015(-) m6A CDS       24284625//25456834//24981863//22608085
chr1:115168075-115168076(-) m6A CDS       24981863//22608085
chr1:115168080-115168081(-) m6A CDS       24981863//22608085
chr1:115168104-115168105(-) m6A CDS       24981863//22608085
chr1:115168125-115168126(-) m6A CDS       24981863//22608085
chr1:115168180-115168181(-) m6A CDS       24981863//22608085
chr1:115168199-115168200(-) m6A CDS       24981863//22608085
chr1:115168308-115168309(-) m6A CDS       24981863//22608085
chr1:115168396-115168397(-) m6A CDS//exon       24284625//24981863//22608085
chr1:115168471-115168472(-) m6A CDS//exon       24284625//25456834//24981863//22608085
chr1:115168539-115168540(-) m6A CDS//exon       25456834//24981863//22608085
chr1:115168546-115168547(-) m6A CDS//exon       25456834//24981863//22608085
chr1:115168571-115168572(-) m6A CDS//exon       24981863//22608085
chr1:115168606-115168607(-) m6A 5'UTR//exon       22608085
chr1:115168647-115168648(-) m6A 5'UTR//exon       22608085
chr1:115168725-115168726(-) m6A 5'UTR//exon       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DENND2C
Exosome Blood     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H9-3p
Interactor2: DENND2C

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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