Basic Information:

  VIRBase ID:  

VHID00173200

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          NXNL2:  NM_001161625     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	NXNL2
miRBase Accession/Entrez ID	MIMAT0014352	158046
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C9orf121//RDCVF2//RdCVF2L

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NXNL2	chr9:91156450(+) A-I      intronic chr9:91163203(+) A-I      intronic chr9:91158924(+) A-I      intronic chr9:91158975(+) A-I      intronic chr9:91158299(+) A-I      intronic chr9:91158364(+) A-I      intronic chr9:91158366(+) A-I      intronic chr9:91158390(+) A-I      intronic chr9:91158370(+) A-I      intronic chr9:91158356(+) A-I      intronic chr9:91158355(+) A-I      intronic chr9:91158329(+) A-I      intronic chr9:91157455(+) A-I      intronic chr9:91157439(+) A-I      intronic chr9:91158820(+) A-I      intronic chr9:91159104(+) A-I      intronic chr9:91155070(+) A-I      intronic chr9:91158992(+) A-I      intronic chr9:91158851(+) A-I      intronic chr9:91158311(+) A-I      intronic chr9:91155167(+) A-I      intronic chr9:91158455(+) A-I      intronic chr9:91158433(+) A-I      intronic chr9:91158428(+) A-I      intronic chr9:91157093(+) A-I      intronic chr9:91158282(+) A-I      intronic chr9:91163257(+) A-I      intronic chr9:91159007(+) A-I      intronic chr9:91158371(+) A-I      intronic chr9:91163482(+) A-I      intronic chr9:91155229(+) A-I      intronic chr9:91158347(+) A-I      intronic chr9:91156245(+) A-I      intronic chr9:91197844(+) A-I      intronic chr9:91158208(+) A-I      intronic chr9:91158908(+) A-I      intronic chr9:91158899(+) A-I      intronic chr9:91161510(+) A-I      intronic chr9:91158294(+) A-I      intronic chr9:91154866(+) A-I      intronic chr9:91158321(+) A-I      intronic chr9:91196571(+) A-I      intronic chr9:91156438(+) A-I      intronic chr9:91197763(+) A-I      intronic chr9:91163258(+) A-I      intronic chr9:91154993(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NXNL2	chr9:91150425-91150426(+) m6A CDS//exon       25456834 chr9:91159347-91159348(+) m6A CDS//exon//intron       25456834 chr9:91159418-91159419(+) m6A CDS//exon//intron       25456834 chr9:91159472-91159473(+) m6A exon//intron       25456834 chr9:91159488-91159489(+) m6A exon//intron       25456834 chr9:91190423-91190424(+) m6A 3'UTR//intron       - chr9:91190469-91190470(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NXNL2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: NXNL2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg