Basic Information:

  VIRBase ID:  

VHID00173143

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          CNIH3:  NM_001322303     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	CNIH3
miRBase Accession/Entrez ID	MIMAT0014352	149111
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CNIH-3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CNIH3	chr1:224770905-224770906(+) m6A exon//intron       - chr1:224770921-224770922(+) m6A exon//intron       - chr1:224774934-224774935(+) m6A exon//intron       - chr1:224774941-224774942(+) m6A exon//intron       - chr1:224774948-224774949(+) m6A exon//intron       - chr1:224774956-224774957(+) m6A exon//intron       - chr1:224774990-224774991(+) m6A exon//intron       - chr1:224774998-224774999(+) m6A exon//intron       - chr1:224775006-224775007(+) m6A exon//intron       - chr1:224804093-224804094(+) m6A 5'UTR//intron       - chr1:224804176-224804177(+) m6A 5'UTR//intron       24209618//25456834//22608085 chr1:224804274-224804275(+) m6A 5'UTR//intron       24209618//25456834//24981863//22608085 chr1:224804283-224804284(+) m6A 5'UTR//intron       24209618//25456834//24981863//22608085 chr1:224804309-224804310(+) m6A 5'UTR//intron       24209618//25456834//24981863//22608085 chr1:224804387-224804388(+) m6A 5'UTR//intron       24209618//25456834//24981863 chr1:224804496-224804497(+) m6A 5'UTR//intron       25456834 chr1:224927065-224927066(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:224927084-224927085(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:224927143-224927144(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:224927170-224927171(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:224927187-224927188(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:224927340-224927341(+) m6A 3'UTR       24209618//25456834//24981863 chr1:224927347-224927348(+) m6A 3'UTR       24209618//25456834//24981863 chr1:224927393-224927394(+) m6A 3'UTR       24209618//25456834//24981863 chr1:224927463-224927464(+) m6A 3'UTR       24209618//25456834//24981863 chr1:224927499-224927500(+) m6A 3'UTR       24209618//25456834//24981863 chr1:224927537-224927538(+) m6A 3'UTR       25456834//24981863 chr1:224927909-224927910(+) m6A 3'UTR       24981863 chr1:224927973-224927974(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CNIH3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: CNIH3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg