Basic Information:

  VIRBase ID:  

VHID00172915

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          ANKS3:  NM_001324130     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	ANKS3
miRBase Accession/Entrez ID	MIMAT0014352	124401
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ANKS3	chr16:4767971(-) A-I      intronic chr16:4768153(-) A-I      intronic chr16:4768171(-) A-I      intronic chr16:4768177(-) A-I      intronic chr16:4770199(-) A-I      intronic chr16:4770208(-) A-I      intronic chr16:4770220(-) A-I      intronic chr16:4770221(-) A-I      intronic chr16:4770699(-) A-I      intronic chr16:4770719(-) A-I      intronic chr16:4783425(-) A-I      intronic chr16:4772698(-) A-I      intronic chr16:4783408(-) A-I      intronic chr16:4783431(-) A-I      intronic chr16:4783475(-) A-I      intronic chr16:4770724(-) A-I      intronic chr16:4771820(-) A-I      intronic chr16:4771841(-) A-I      intronic chr16:4771850(-) A-I      intronic chr16:4769587(-) A-I      intronic chr16:4773978(-) A-I      intronic chr16:4771712(-) A-I      intronic chr16:4768003(-) A-I      intronic chr16:4770406(-) A-I      intronic chr16:4770425(-) A-I      intronic chr16:4773979(-) A-I      intronic chr16:4781357(-) A-I      intronic chr16:4779544(-) A-I      intronic chr16:4770676(-) A-I      intronic chr16:4770679(-) A-I      intronic chr16:4759955(-) A-I      intronic chr16:4769190(-) A-I      intronic chr16:4770280(-) A-I      intronic chr16:4770376(-) A-I      intronic chr16:4769265(-) A-I      intronic chr16:4770697(-) A-I      intronic chr16:4770856(-) A-I      intronic chr16:4771525(-) A-I      intronic chr16:4768000(-) A-I      intronic chr16:4767989(-) A-I      intronic chr16:4767929(-) A-I      intronic chr16:4767899(-) A-I      intronic chr16:4767893(-) A-I      intronic chr16:4767882(-) A-I      intronic chr16:4767862(-) A-I      intronic chr16:4767844(-) A-I      intronic chr16:4779486(-) A-I      intronic chr16:4779499(-) A-I      intronic chr16:4771831(-) A-I      intronic chr16:4771832(-) A-I      intronic chr16:4779538(-) A-I      intronic chr16:4779540(-) A-I      intronic chr16:4779541(-) A-I      intronic chr16:4771926(-) A-I      intronic chr16:4772388(-) A-I      intronic chr16:4772492(-) A-I      intronic chr16:4772501(-) A-I      intronic chr16:4772508(-) A-I      intronic chr16:4772559(-) A-I      intronic chr16:4772856(-) A-I      intronic chr16:4773799(-) A-I      intronic chr16:4768188(-) A-I      intronic chr16:4769093(-) A-I      intronic chr16:4762355(-) A-I      intronic chr16:4762250(-) A-I      intronic chr16:4760873(-) A-I      intronic chr16:4760635(-) A-I      intronic chr16:4759968(-) A-I      intronic chr16:4759966(-) A-I      intronic chr16:4765835(-) A-I      intronic chr16:4759872(-) A-I      intronic chr16:4757949(-) A-I      intronic chr16:4757894(-) A-I      intronic chr16:4752996(-) A-I      intronic chr16:4752978(-) A-I      intronic chr16:4752896(-) A-I      intronic chr16:4770381(-) A-I      intronic chr16:4770387(-) A-I      intronic chr16:4770400(-) A-I      intronic chr16:4769152(-) A-I      intronic chr16:4770690(-) A-I      intronic chr16:4769250(-) A-I      intronic chr16:4783519(-) A-I      intronic chr16:4768194(-) A-I      intronic chr16:4770260(-) A-I      intronic chr16:4771707(-) A-I      intronic chr16:4772697(-) A-I      intronic chr16:4771500(-) A-I      intronic chr16:4767718(-) A-I      intronic chr16:4776197(-) A-I      intronic chr16:4772338(-) A-I      intronic chr16:4762286(-) A-I      intronic chr16:4779539(-) A-I      intronic chr16:4766280(-) A-I      intronic chr16:4766662(-) A-I      intronic chr16:4769106(-) A-I      intronic chr16:4766733(-) A-I      intronic chr16:4771725(-) A-I      intronic chr16:4769297(-) A-I      intronic chr16:4757895(-) A-I      intronic chr16:4770712(-) A-I      intronic chr16:4765545(-) A-I      intronic chr16:4759827(-) A-I      intronic chr16:4771888(-) A-I      intronic chr16:4773570(-) A-I      intronic chr16:4772761(-) A-I      intronic chr16:4767935(-) A-I      intronic chr16:4760452(-) A-I      intronic chr16:4767556(-) A-I      intronic chr16:4769551(-) A-I      intronic chr16:4767482(-) A-I      intronic chr16:4767696(-) A-I      intronic chr16:4771742(-) A-I      intronic chr16:4757525(-) A-I      intronic chr16:4773870(-) A-I      intronic chr16:4768087(-) A-I      intronic chr16:4773950(-) A-I      intronic chr16:4769717(-) A-I      intronic chr16:4768048(-) A-I      intronic chr16:4758040(-) A-I      intronic chr16:4775758(-) A-I      intronic chr16:4775909(-) A-I      intronic chr16:4783524(-) A-I      intronic chr16:4769156(-) A-I      intronic chr16:4771418(-) A-I      intronic chr16:4753252(-) A-I      intronic chr16:4766804(-) A-I      intronic chr16:4772833(-) A-I      intronic chr16:4782607(-) A-I      intronic chr16:4773562(-) A-I      intronic chr16:4762285(-) A-I      intronic chr16:4759950(-) A-I      intronic chr16:4770816(-) A-I      intronic chr16:4766249(-) A-I      intronic chr16:4782517(-) A-I      intronic chr16:4770351(-) A-I      intronic chr16:4769980(-) A-I      intronic chr16:4767421(-) A-I      intronic chr16:4769714(-) A-I      intronic chr16:4771815(-) A-I      intronic chr16:4767830(-) A-I      intronic chr16:4770776(-) A-I      intronic chr16:4772928(-) A-I      intronic chr16:4759820(-) A-I      intronic chr16:4780814(-) A-I      intronic chr16:4753494(-) A-I      intronic chr16:4766675(-) A-I      intronic chr16:4768022(-) A-I      intronic chr16:4766674(-) A-I      intronic chr16:4783430(-) A-I      intronic chr16:4765514(-) A-I      intronic chr16:4780770(-) A-I      intronic chr16:4767809(-) A-I      intronic chr16:4767747(-) A-I      intronic chr16:4773801(-) A-I      intronic chr16:4770715(-) A-I      intronic chr16:4782583(-) A-I      intronic chr16:4767832(-) A-I      intronic chr16:4767713(-) A-I      intronic chr16:4753550(-) A-I      intronic chr16:4766700(-) A-I      intronic chr16:4771840(-) A-I      intronic chr16:4769211(-) A-I      intronic chr16:4767386(-) A-I      intronic chr16:4771869(-) A-I      intronic chr16:4767804(-) A-I      intronic chr16:4769332(-) A-I      intronic chr16:4768210(-) A-I      intronic chr16:4767029(-) A-I      intronic chr16:4771560(-) A-I      intronic chr16:4767487(-) A-I      intronic chr16:4783466(-) A-I      intronic chr16:4769153(-) A-I      intronic chr16:4760615(-) A-I      intronic chr16:4773555(-) A-I      intronic chr16:4759846(-) A-I      intronic chr16:4768163(-) A-I      intronic chr16:4771737(-) A-I      intronic chr16:4769583(-) A-I      intronic chr16:4771772(-) A-I      intronic chr16:4755711(-) A-I      intronic chr16:4766114(-) A-I      intronic chr16:4781346(-) A-I      intronic chr16:4772850(-) A-I      intronic chr16:4780846(-) A-I      intronic chr16:4771768(-) A-I      intronic chr16:4767762(-) A-I      intronic chr16:4771708(-) A-I      intronic chr16:4771807(-) A-I      intronic chr16:4761475(-) A-I      intronic chr16:4769559(-) A-I      intronic chr16:4766262(-) A-I      intronic chr16:4768170(-) A-I      intronic chr16:4757556(-) A-I      intronic chr16:4769678(-) A-I      intronic chr16:4772417(-) A-I      intronic chr16:4771753(-) A-I      intronic chr16:4767752(-) A-I      intronic chr16:4772392(-) A-I      intronic chr16:4772836(-) A-I      intronic chr16:4779566(-) A-I      intronic chr16:4766279(-) A-I      intronic chr16:4760006(-) A-I      intronic chr16:4769233(-) A-I      intronic chr16:4771530(-) A-I      intronic chr16:4768193(-) A-I      intronic chr16:4769132(-) A-I      intronic chr16:4759794(-) A-I      intronic chr16:4768216(-) A-I      intronic chr16:4769582(-) A-I      intronic chr16:4772453(-) A-I      intronic chr16:4769079(-) A-I      intronic chr16:4773534(-) A-I      intronic chr16:4761565(-) A-I      intronic chr16:4767447(-) A-I      intronic chr16:4771529(-) A-I      intronic chr16:4770283(-) A-I      intronic chr16:4771366(-) A-I      intronic chr16:4771729(-) A-I      intronic chr16:4771512(-) A-I      intronic chr16:4779537(-) A-I      intronic chr16:4771365(-) A-I      intronic chr16:4757997(-) A-I      intronic chr16:4766736(-) A-I      intronic chr16:4773478(-) A-I      intronic chr16:4765590(-) A-I      intronic chr16:4766795(-) A-I      intronic chr16:4769713(-) A-I      intronic chr16:4774028(-) A-I      intronic chr16:4768121(-) A-I      intronic chr16:4781366(-) A-I      intronic chr16:4753543(-) A-I      intronic chr16:4761210(-) A-I      intronic chr16:4771304(-) A-I      intronic chr16:4759856(-) A-I      intronic chr16:4760594(-) A-I      intronic chr16:4768179(-) A-I      intronic chr16:4773513(-) A-I      intronic chr16:4779550(-) A-I      intronic chr16:4772756(-) A-I      intronic chr16:4771932(-) A-I      intronic chr16:4771879(-) A-I      intronic chr16:4770790(-) A-I      intronic chr16:4773459(-) A-I      intronic chr16:4768083(-) A-I      intronic chr16:4752952(-) A-I      intronic chr16:4769281(-) A-I      intronic chr16:4772668(-) A-I      intronic chr16:4768086(-) A-I      intronic chr16:4767995(-) A-I      intronic chr16:4772684(-) A-I      intronic chr16:4767869(-) A-I      intronic chr16:4773813(-) A-I      intronic chr16:4769320(-) A-I      intronic chr16:4769769(-) A-I      intronic chr16:4773521(-) A-I      intronic chr16:4767994(-) A-I      intronic chr16:4779490(-) A-I      intronic chr16:4770698(-) A-I      intronic chr16:4766833(-) A-I      intronic chr16:4772837(-) A-I      intronic chr16:4780771(-) A-I      intronic chr16:4767174(-) A-I      intronic chr16:4753237(-) A-I      intronic chr16:4771777(-) A-I      intronic chr16:4769621(-) A-I      intronic chr16:4773489(-) A-I      intronic chr16:4771331(-) A-I      intronic chr16:4773999(-) A-I      intronic chr16:4771887(-) A-I      intronic chr16:4781445(-) A-I      intronic chr16:4770749(-) A-I      intronic chr16:4771909(-) A-I      intronic chr16:4773539(-) A-I      intronic chr16:4771910(-) A-I      intronic chr16:4772842(-) A-I      intronic chr16:4771353(-) A-I      intronic chr16:4775724(-) A-I      intronic chr16:4769271(-) A-I      intronic chr16:4771736(-) A-I      intronic chr16:4769718(-) A-I      intronic chr16:4781405(-) A-I      intronic chr16:4766864(-) A-I      intronic chr16:4770936(-) A-I      intronic chr16:4771817(-) A-I      intronic chr16:4771811(-) A-I      intronic chr16:4769700(-) A-I      intronic chr16:4767925(-) A-I      intronic chr16:4772337(-) A-I      intronic chr16:4771745(-) A-I      intronic chr16:4774040(-) A-I      intronic chr16:4782466(-) A-I      intronic chr16:4769118(-) A-I      intronic chr16:4767810(-) A-I      intronic chr16:4770363(-) A-I      intronic chr16:4768185(-) A-I      intronic chr16:4766914(-) A-I      intronic chr16:4770723(-) A-I      intronic chr16:4757539(-) A-I      intronic chr16:4773940(-) A-I      intronic chr16:4772926(-) A-I      intronic chr16:4772727(-) A-I      intronic chr16:4772662(-) A-I      intronic chr16:4769328(-) A-I      intronic chr16:4782518(-) A-I      intronic chr16:4760544(-) A-I      intronic chr16:4779440(-) A-I      intronic chr16:4772689(-) A-I      intronic chr16:4770685(-) A-I      intronic chr16:4767157(-) A-I      intronic chr16:4767849(-) A-I      intronic chr16:4758053(-) A-I      intronic chr16:4773561(-) A-I      intronic chr16:4780758(-) A-I      intronic chr16:4757992(-) A-I      intronic chr16:4769264(-) A-I      intronic chr16:4769637(-) A-I      intronic chr16:4773856(-) A-I      intronic chr16:4770259(-) A-I      intronic chr16:4771830(-) A-I      intronic chr16:4774059(-) A-I      intronic chr16:4767961(-) A-I      intronic chr16:4769586(-) A-I      intronic chr16:4767780(-) A-I      intronic chr16:4769257(-) A-I      intronic chr16:4771778(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ANKS3	chr16:4769118(-) A-I intron -    21960545 chr16:4766279(-) A-G intron -    22484847 chr16:4766280(-) A-G intron -    22484847 chr16:4766662(-) A-G intron -    22484847 chr16:4768210(-) A-G intron -    22484847 chr16:4770776(-) A-G intron -    22484847 chr16:4779537(-) A-G intron -    22484847 chr16:4779539(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ANKS3	chr16:4746517-4746518(-) m6A 3'UTR//exon       24981863//27773535 chr16:4746564-4746565(-) m6A 3'UTR//exon       24981863//27773535 chr16:4746579-4746580(-) m6A 3'UTR//exon       24981863//27773535 chr16:4746685-4746686(-) m6A 3'UTR//exon       24284625//27773535//27371828 chr16:4746763-4746764(-) m6A 3'UTR//exon       24284625//24209618//27371828//27773536 chr16:4746840-4746841(-) m6A 3'UTR//exon       24284625//24209618//27773535//27371828 chr16:4747033-4747034(-) m6A 3'UTR//CDS//exon       27773535//27773536 chr16:4747045-4747046(-) m1A 3'UTR//CDS//exon       26863196 chr16:4747350-4747351(-) m6A 3'UTR//CDS//exon       27773536 chr16:4748024-4748025(-) m6A 3'UTR//CDS//exon       27773536 chr16:4748160-4748161(-) m6A exon//intron       27773536 chr16:4748436-4748437(-) m6A 3'UTR//CDS//exon       24209618//27773536 chr16:4748496-4748497(-) m6A 3'UTR//CDS//exon       24209618//27371828//27773536 chr16:4748511-4748512(-) m6A 3'UTR//CDS//exon       24209618//27371828//27773536 chr16:4749004-4749005(-) m6A exon//intron       24284625 chr16:4749175-4749176(-) m6A 3'UTR//CDS//exon       - chr16:4749310-4749311(-) m6A exon//intron       24284625//25456834//27371828//22608085 chr16:4749362-4749363(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:4749400-4749401(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4749442-4749443(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4749518-4749519(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4749533-4749534(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4749549-4749550(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4749572-4749573(-) m6A exon//intron       24284625//25456834//24981863//27371828//22608085 chr16:4749580-4749581(-) m6A exon//intron       24284625//25456834//24981863//27371828//22608085 chr16:4749587-4749588(-) m6A exon//intron       25456834//24981863//22608085 chr16:4749618-4749619(-) m6A exon//intron       25456834//22608085 chr16:4749646-4749647(-) m6A exon//intron       22608085 chr16:4749757-4749758(-) m6A 3'UTR//exon//intron       22608085 chr16:4749790-4749791(-) m6A 3'UTR//exon//intron       22608085 chr16:4749801-4749802(-) m6A 3'UTR//exon//intron       22608085 chr16:4749896-4749897(-) m6A 3'UTR//exon//intron       22608085 chr16:4750964-4750965(-) m6A 3'UTR//intron       27371828//27773536 chr16:4750976-4750977(-) m6A 3'UTR//CDS//exon//intron       27371828//27773536 chr16:4750999-4751000(-) m6A 3'UTR//CDS//exon//intron       27371828//27773536 chr16:4751077-4751078(-) m6A 3'UTR//CDS//exon//intron       27773536 chr16:4751099-4751100(-) m6A 3'UTR//CDS//exon//intron       27773536 chr16:4751539-4751540(-) m6A 3'UTR//CDS//exon//intron       27371828//27773536 chr16:4752182-4752183(-) m1A 3'UTR//CDS//exon       26863196 chr16:4752194-4752195(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr16:4755159-4755160(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr16:4755201-4755202(-) m6A 3'UTR//CDS//exon       27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ANKS3	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: ANKS3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg