Basic Information:

  VIRBase ID:  

VHID00172806

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          ZBED6CL:  NM_138434     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	ZBED6CL
miRBase Accession/Entrez ID	MIMAT0014352	113763
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C7orf29

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZBED6CL	chr7:150026959-150026960(+) m6A 5'UTR       24981863//22608085 chr7:150027005-150027006(+) m6A 5'UTR       25456834//24981863//22608085 chr7:150027173-150027174(+) m6A 5'UTR       24284625//25456834//22575960//22608085 chr7:150027264-150027265(+) m6A 5'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150027329-150027330(+) m6A 5'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150027461-150027462(+) m6A 5'UTR       24284625//22575960//22608085 chr7:150027581-150027582(+) Y CDS       26075521 chr7:150027725-150027726(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150027845-150027846(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150027887-150027888(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150028105-150028106(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150028224-150028225(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150028248-150028249(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150028373-150028374(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150028404-150028405(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150028438-150028439(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150028485-150028486(+) Y 3'UTR       26075521 chr7:150028527-150028528(+) m6A 3'UTR       25456834//22608085 chr7:150029330-150029331(+) m6A 3'UTR       - chr7:150029385-150029386(+) m6A 3'UTR       25456834//24981863//22608085 chr7:150029408-150029409(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr7:150029513-150029514(+) m6A 3'UTR       25456834 chr7:150029609-150029610(+) Y 3'UTR       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZBED6CL	Chromatin K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: ZBED6CL

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg