Basic Information:

  VIRBase ID:  

VHID00172657

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          GLB1L2:  NM_001370461     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	GLB1L2
miRBase Accession/Entrez ID	MIMAT0014352	89944
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MST114//MSTP114

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GLB1L2	chr11:134215439(+) A-I      intronic chr11:134214652(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GLB1L2	chr11:134230784(+) A-I intron -    15342557 chr11:134230850(+) A-I intron -    15342557 chr11:134230860(+) A-I intron -    15342557 chr11:134230862(+) A-I intron -    15342557 chr11:134230926(+) A-I intron -    15342557 chr11:134230952(+) A-I intron -    15342557 chr11:134231002(+) A-I intron -    15342557 chr11:134231126(+) A-I intron -    15342557 chr11:134242327(+) A-I intron -    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GLB1L2	chr11:134201925-134201926(+) m6A 5'UTR       24284625 chr11:134201948-134201949(+) m6A 5'UTR       24284625 chr11:134201999-134202000(+) m6A CDS       24284625 chr11:134212652-134212653(+) m6A CDS       24284625 chr11:134212718-134212719(+) m6A CDS       24284625 chr11:134212799-134212800(+) m6A CDS       24284625 chr11:134239752-134239753(+) Y CDS//exon       26075521 chr11:134244916-134244917(+) m6A CDS//exon       24284625 chr11:134244935-134244936(+) m6A CDS//exon       24284625 chr11:134244987-134244988(+) m6A 3'UTR//exon       24284625 chr11:134245109-134245110(+) m6A 3'UTR//exon       24284625 chr11:134245314-134245315(+) m6A 3'UTR//exon       24284625//25456834//22608085 chr11:134245492-134245493(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr11:134245506-134245507(+) m6A 3'UTR//exon       22608085 chr11:134245572-134245573(+) m6A 3'UTR//exon       22608085 chr11:134245634-134245635(+) m6A 3'UTR//exon       25456834//22608085 chr11:134245688-134245689(+) m6A 3'UTR//exon       25456834//22608085 chr11:134245758-134245759(+) m6A 3'UTR//exon       24284625//25456834//22608085 chr11:134245828-134245829(+) m6A 3'UTR//exon//intron       25456834//22608085 chr11:134245968-134245969(+) m6A 3'UTR//intron       24284625//25456834 chr11:134246038-134246039(+) m6A 3'UTR//intron       24284625//25456834 chr11:134246086-134246087(+) m6A 3'UTR//intron       24284625//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GLB1L2	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: GLB1L2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg