Basic Information:

  VIRBase ID:  

VHID00172595

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          AIFM2:  NM_032797     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	AIFM2
miRBase Accession/Entrez ID	MIMAT0014352	84883
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AMID//FSP1//PRG3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AIFM2	chr10:71888271(-) A-I      intronic chr10:71885100(-) A-I      intronic chr10:71888220(-) A-I      intronic chr10:71888337(-) A-I      intronic chr10:71889876(-) A-I      intronic chr10:71888712(-) A-I      intronic chr10:71889870(-) A-I      intronic chr10:71889760(-) A-I      intronic chr10:71888263(-) A-I      intronic chr10:71888531(-) A-I      intronic chr10:71888493(-) A-I      intronic chr10:71889683(-) A-I      intronic chr10:71885169(-) A-I      intronic chr10:71885174(-) A-I      intronic chr10:71888207(-) A-I      intronic chr10:71888973(-) A-I      intronic chr10:71885516(-) A-I      intronic chr10:71888126(-) A-I      intronic chr10:71885499(-) A-I      intronic chr10:71882913(-) A-I      intronic chr10:71889718(-) A-I      intronic chr10:71885112(-) A-I      intronic chr10:71873171(-) A-I      3'UTR chr10:71873155(-) A-I      3'UTR chr10:71873036(-) A-I      3'UTR chr10:71882957(-) A-I      intronic chr10:71882855(-) A-I      intronic chr10:71889857(-) A-I      intronic chr10:71885084(-) A-I      intronic chr10:71888809(-) A-I      intronic chr10:71888501(-) A-I      intronic chr10:71889863(-) A-I      intronic chr10:71888847(-) A-I      intronic chr10:71889889(-) A-I      intronic chr10:71885500(-) A-I      intronic chr10:71889844(-) A-I      intronic chr10:71888312(-) A-I      intronic chr10:71889748(-) A-I      intronic chr10:71888534(-) A-I      intronic chr10:71888854(-) A-I      intronic chr10:71889755(-) A-I      intronic chr10:71888626(-) A-I      intronic chr10:71888928(-) A-I      intronic chr10:71889719(-) A-I      intronic chr10:71888548(-) A-I      intronic chr10:71889856(-) A-I      intronic chr10:71882864(-) A-I      intronic chr10:71885066(-) A-I      intronic chr10:71888211(-) A-I      intronic chr10:71862293(-) A-I      intronic chr10:71888356(-) A-I      intronic chr10:71885348(-) A-I      intronic chr10:71888549(-) A-I      intronic chr10:71888253(-) A-I      intronic chr10:71888279(-) A-I      intronic chr10:71888968(-) A-I      intronic chr10:71888133(-) A-I      intronic chr10:71889757(-) A-I      intronic chr10:71885138(-) A-I      intronic chr10:71888555(-) A-I      intronic chr10:71885454(-) A-I      intronic chr10:71888994(-) A-I      intronic chr10:71888972(-) A-I      intronic chr10:71889908(-) A-I      intronic chr10:71888183(-) A-I      intronic chr10:71888226(-) A-I      intronic chr10:71882854(-) A-I      intronic chr10:71888938(-) A-I      intronic chr10:71873226(-) A-I      3'UTR chr10:71888995(-) A-I      intronic chr10:71886738(-) A-I      intronic chr10:71885532(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AIFM2	chr10:71888994(-) A-G intron -    22484847 chr10:71889863(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AIFM2	chr10:71858194-71858195(-) m6A 3'UTR       27773535 chr10:71858220-71858221(-) m6A 3'UTR       27773535 chr10:71858246-71858247(-) m6A 3'UTR       27773535 chr10:71858262-71858263(-) m6A 3'UTR       27773535 chr10:71858324-71858325(-) m6A 3'UTR       27773535 chr10:71858334-71858335(-) m6A 3'UTR       27773535 chr10:71858344-71858345(-) m6A 3'UTR       27773535 chr10:71858387-71858388(-) m6A 3'UTR       27773535 chr10:71858427-71858428(-) m6A 3'UTR       27773535 chr10:71858443-71858444(-) m6A 3'UTR       27773535 chr10:71858516-71858517(-) m6A 3'UTR       27773535 chr10:71872194-71872195(-) m6A 3'UTR//intron       24981863//27773535 chr10:71872210-71872211(-) m6A 3'UTR//intron       24981863//27773535 chr10:71872244-71872245(-) m6A 3'UTR//intron       27773535 chr10:71873475-71873476(-) m6A 3'UTR//intron       - chr10:71873486-71873487(-) m6A 3'UTR//intron       - chr10:71873756-71873757(-) m6A 3'UTR//intron       24284625//24209618//24981863//28052920//27773535 chr10:71873784-71873785(-) m6A 3'UTR//intron       24284625//24209618//24981863//28052920//27773535//22608085 chr10:71873849-71873850(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr10:71873887-71873888(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr10:71873912-71873913(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr10:71873956-71873957(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr10:71873982-71873983(-) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr10:71874555-71874556(-) m6A exon//intron       24284625 chr10:71874581-71874582(-) m6A exon//intron       24284625 chr10:71876460-71876461(-) m6A CDS//exon       24284625//27773535 chr10:71883188-71883189(-) m6A CDS       27773535 chr10:71883197-71883198(-) m6A CDS       27773535 chr10:71883230-71883231(-) m6A CDS       27773535 chr10:71883261-71883262(-) m6A CDS       27773535 chr10:71883665-71883666(-) m6A CDS       27773535 chr10:71883709-71883710(-) m6A CDS       27773535 chr10:71883718-71883719(-) m6A CDS       27773535 chr10:71892614-71892615(-) m6A 5'UTR       24981863//27371828 chr10:71892657-71892658(-) m6A 5'UTR       24981863 chr10:71892677-71892678(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AIFM2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: AIFM2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg