Basic Information:

  VIRBase ID:  

VHID00172183

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          DCAF10:  NM_024345     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	DCAF10
miRBase Accession/Entrez ID	MIMAT0014352	79269
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	WDR32

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DCAF10	chr9:37846571(+) A-I      intronic chr9:37828010(+) A-I      intronic chr9:37826952(+) A-I      intronic chr9:37827929(+) A-I      intronic chr9:37826962(+) A-I      intronic chr9:37827066(+) A-I      intronic chr9:37827057(+) A-I      intronic chr9:37838767(+) A-I      intronic chr9:37832960(+) A-I      intronic chr9:37833014(+) A-I      intronic chr9:37833992(+) A-I      intronic chr9:37834016(+) A-I      intronic chr9:37834037(+) A-I      intronic chr9:37834109(+) A-I      intronic chr9:37846634(+) A-I      intronic chr9:37846637(+) A-I      intronic chr9:37846643(+) A-I      intronic chr9:37846651(+) A-I      intronic chr9:37846663(+) A-I      intronic chr9:37847004(+) A-I      intronic chr9:37847012(+) A-I      intronic chr9:37847017(+) A-I      intronic chr9:37847103(+) A-I      intronic chr9:37847130(+) A-I      intronic chr9:37847139(+) A-I      intronic chr9:37847175(+) A-I      intronic chr9:37847185(+) A-I      intronic chr9:37849618(+) A-I      intronic chr9:37849625(+) A-I      intronic chr9:37849746(+) A-I      intronic chr9:37849756(+) A-I      intronic chr9:37838741(+) A-I      intronic chr9:37854367(+) A-I      intronic chr9:37854365(+) A-I      intronic chr9:37854344(+) A-I      intronic chr9:37854343(+) A-I      intronic chr9:37854340(+) A-I      intronic chr9:37854333(+) A-I      intronic chr9:37852424(+) A-I      intronic chr9:37852413(+) A-I      intronic chr9:37852409(+) A-I      intronic chr9:37852394(+) A-I      intronic chr9:37852384(+) A-I      intronic chr9:37838702(+) A-I      intronic chr9:37838679(+) A-I      intronic chr9:37827923(+) A-I      intronic chr9:37837928(+) A-I      intronic chr9:37837898(+) A-I      intronic chr9:37837474(+) A-I      intronic chr9:37826903(+) A-I      intronic chr9:37826900(+) A-I      intronic chr9:37826879(+) A-I      intronic chr9:37825973(+) A-I      intronic chr9:37825957(+) A-I      intronic chr9:37818265(+) A-I      intronic chr9:37818256(+) A-I      intronic chr9:37818129(+) A-I      intronic chr9:37818119(+) A-I      intronic chr9:37818115(+) A-I      intronic chr9:37818048(+) A-I      intronic chr9:37815980(+) A-I      intronic chr9:37815963(+) A-I      intronic chr9:37815858(+) A-I      intronic chr9:37814419(+) A-I      intronic chr9:37814407(+) A-I      intronic chr9:37814328(+) A-I      intronic chr9:37814205(+) A-I      intronic chr9:37813282(+) A-I      intronic chr9:37813115(+) A-I      intronic chr9:37812731(+) A-I      intronic chr9:37812730(+) A-I      intronic chr9:37812650(+) A-I      intronic chr9:37809795(+) A-I      intronic chr9:37809719(+) A-I      intronic chr9:37808356(+) A-I      intronic chr9:37837401(+) A-I      intronic chr9:37809567(+) A-I      intronic chr9:37809683(+) A-I      intronic chr9:37809707(+) A-I      intronic chr9:37835456(+) A-I      intronic chr9:37835455(+) A-I      intronic chr9:37828022(+) A-I      intronic chr9:37828020(+) A-I      intronic chr9:37835429(+) A-I      intronic chr9:37835411(+) A-I      intronic chr9:37847146(+) A-I      intronic chr9:37851698(+) A-I      intronic chr9:37851536(+) A-I      intronic chr9:37849857(+) A-I      intronic chr9:37849770(+) A-I      intronic chr9:37849766(+) A-I      intronic chr9:37835320(+) A-I      intronic chr9:37835057(+) A-I      intronic chr9:37834992(+) A-I      intronic chr9:37835691(+) A-I      intronic chr9:37837196(+) A-I      intronic chr9:37837377(+) A-I      intronic chr9:37838761(+) A-I      intronic chr9:37838754(+) A-I      intronic chr9:37837400(+) A-I      intronic chr9:37835656(+) A-I      intronic chr9:37835469(+) A-I      intronic chr9:37834890(+) A-I      intronic chr9:37849624(+) A-I      intronic chr9:37808169(+) A-I      intronic chr9:37826923(+) A-I      intronic chr9:37826916(+) A-I      intronic chr9:37844359(+) A-I      intronic chr9:37844353(+) A-I      intronic chr9:37844336(+) A-I      intronic chr9:37844335(+) A-I      intronic chr9:37844326(+) A-I      intronic chr9:37843275(+) A-I      intronic chr9:37843249(+) A-I      intronic chr9:37835246(+) A-I      intronic chr9:37835231(+) A-I      intronic chr9:37835212(+) A-I      intronic chr9:37835209(+) A-I      intronic chr9:37835207(+) A-I      intronic chr9:37835177(+) A-I      intronic chr9:37835176(+) A-I      intronic chr9:37825872(+) A-I      intronic chr9:37825871(+) A-I      intronic chr9:37825868(+) A-I      intronic chr9:37825867(+) A-I      intronic chr9:37825866(+) A-I      intronic chr9:37825863(+) A-I      intronic chr9:37825860(+) A-I      intronic chr9:37838614(+) A-I      intronic chr9:37825855(+) A-I      intronic chr9:37825854(+) A-I      intronic chr9:37825839(+) A-I      intronic chr9:37825834(+) A-I      intronic chr9:37825832(+) A-I      intronic chr9:37825830(+) A-I      intronic chr9:37825820(+) A-I      intronic chr9:37815974(+) A-I      intronic chr9:37815940(+) A-I      intronic chr9:37808298(+) A-I      intronic chr9:37808294(+) A-I      intronic chr9:37808282(+) A-I      intronic chr9:37832268(+) A-I      intronic chr9:37829352(+) A-I      intronic chr9:37829251(+) A-I      intronic chr9:37829250(+) A-I      intronic chr9:37828363(+) A-I      intronic chr9:37828357(+) A-I      intronic chr9:37807763(+) A-I      intronic chr9:37807760(+) A-I      intronic chr9:37807759(+) A-I      intronic chr9:37807753(+) A-I      intronic chr9:37828068(+) A-I      intronic chr9:37807746(+) A-I      intronic chr9:37807734(+) A-I      intronic chr9:37832920(+) A-I      intronic chr9:37832335(+) A-I      intronic chr9:37832272(+) A-I      intronic chr9:37839208(+) A-I      intronic chr9:37839126(+) A-I      intronic chr9:37834157(+) A-I      intronic chr9:37839079(+) A-I      intronic chr9:37839217(+) A-I      intronic chr9:37834066(+) A-I      intronic chr9:37839221(+) A-I      intronic chr9:37838768(+) A-I      intronic chr9:37837900(+) A-I      intronic chr9:37808284(+) A-I      intronic chr9:37839222(+) A-I      intronic chr9:37839309(+) A-I      intronic chr9:37843065(+) A-I      intronic chr9:37843076(+) A-I      intronic chr9:37843078(+) A-I      intronic chr9:37843108(+) A-I      intronic chr9:37843176(+) A-I      intronic chr9:37843180(+) A-I      intronic chr9:37843274(+) A-I      intronic chr9:37844365(+) A-I      intronic chr9:37844386(+) A-I      intronic chr9:37844573(+) A-I      intronic chr9:37864203(+) A-I      3'UTR chr9:37831059(+) A-I      intronic chr9:37846547(+) A-I      intronic chr9:37838659(+) A-I      intronic chr9:37815868(+) A-I      intronic chr9:37808181(+) A-I      intronic chr9:37814236(+) A-I      intronic chr9:37829175(+) A-I      intronic chr9:37846583(+) A-I      intronic chr9:37834132(+) A-I      intronic chr9:37835392(+) A-I      intronic chr9:37843223(+) A-I      intronic chr9:37846579(+) A-I      intronic chr9:37849563(+) A-I      intronic chr9:37815948(+) A-I      intronic chr9:37863173(+) A-I      3'UTR chr9:37863167(+) A-I      3'UTR chr9:37863298(+) A-I      3'UTR chr9:37863208(+) A-I      3'UTR chr9:37863161(+) A-I      3'UTR chr9:37863136(+) A-I      3'UTR chr9:37863202(+) A-I      3'UTR chr9:37863165(+) A-I      3'UTR chr9:37863244(+) A-I      3'UTR chr9:37863238(+) A-I      3'UTR chr9:37863232(+) A-I      3'UTR chr9:37863105(+) A-I      3'UTR chr9:37863267(+) A-I      3'UTR chr9:37863273(+) A-I      3'UTR chr9:37863268(+) A-I      3'UTR chr9:37863158(+) A-I      3'UTR chr9:37863307(+) A-I      3'UTR chr9:37863137(+) A-I      3'UTR chr9:37863122(+) A-I      3'UTR chr9:37863070(+) A-I      3'UTR chr9:37863203(+) A-I      3'UTR chr9:37863075(+) A-I      3'UTR chr9:37863069(+) A-I      3'UTR chr9:37863152(+) A-I      3'UTR chr9:37863108(+) A-I      3'UTR chr9:37863212(+) A-I      3'UTR chr9:37863147(+) A-I      3'UTR chr9:37863139(+) A-I      3'UTR chr9:37863162(+) A-I      3'UTR chr9:37863216(+) A-I      3'UTR chr9:37863243(+) A-I      3'UTR chr9:37863235(+) A-I      3'UTR chr9:37863113(+) A-I      3'UTR chr9:37863255(+) A-I      3'UTR chr9:37863230(+) A-I      3'UTR chr9:37863283(+) A-I      3'UTR chr9:37863176(+) A-I      3'UTR chr9:37863251(+) A-I      3'UTR chr9:37834117(+) A-I      intronic chr9:37831826(+) A-I      intronic chr9:37851120(+) A-I      intronic chr9:37833063(+) A-I      intronic chr9:37846715(+) A-I      intronic chr9:37843276(+) A-I      intronic chr9:37828074(+) A-I      intronic chr9:37815877(+) A-I      intronic chr9:37815981(+) A-I      intronic chr9:37843084(+) A-I      intronic chr9:37829749(+) A-I      intronic chr9:37851085(+) A-I      intronic chr9:37832966(+) A-I      intronic chr9:37835200(+) A-I      intronic chr9:37817355(+) A-I      intronic chr9:37846593(+) A-I      intronic chr9:37814344(+) A-I      intronic chr9:37828070(+) A-I      intronic chr9:37835391(+) A-I      intronic chr9:37835321(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DCAF10	chr9:37835932(+) A-I intron -    22327324 chr9:37836083(+) A-I intron -    22327324 chr9:37836117(+) A-I intron -    22327324 chr9:37836171(+) A-I intron -    22327324 chr9:37836181(+) A-I intron -    22327324 chr9:37836289(+) A-I intron -    22327324 chr9:37863069(+) A-I intron -    22028664 chr9:37863070(+) A-I intron -    22028664 chr9:37863075(+) A-I intron -    22028664 chr9:37863105(+) A-I intron -    22028664 chr9:37863108(+) A-I intron -    22028664 chr9:37863113(+) A-I intron -    22028664 chr9:37863122(+) A-I intron -    22028664 chr9:37863136(+) A-I intron -    22028664 chr9:37863137(+) A-I intron -    22028664 chr9:37863139(+) A-I intron -    22028664 chr9:37863147(+) A-I intron -    22028664 chr9:37863152(+) A-I intron -    22028664 chr9:37863158(+) A-I intron -    22028664 chr9:37863161(+) A-I intron -    22028664 chr9:37863162(+) A-I intron -    22028664 chr9:37863165(+) A-I intron -    22028664 chr9:37863167(+) A-I intron -    22028664 chr9:37863173(+) A-I intron -    22028664 chr9:37863176(+) A-I intron -    22028664 chr9:37863196(+) A-I intron -    22028664 chr9:37863202(+) A-I intron -    22028664 chr9:37863203(+) A-I intron -    22028664 chr9:37863208(+) A-I intron -    22028664 chr9:37863212(+) A-I intron -    22028664 chr9:37863216(+) A-I intron -    22028664 chr9:37863230(+) A-I intron -    22028664 chr9:37863232(+) A-I intron -    22028664 chr9:37863235(+) A-I intron -    22028664 chr9:37863238(+) A-I intron -    22028664 chr9:37863243(+) A-I intron -    22028664 chr9:37863244(+) A-I intron -    22028664 chr9:37863251(+) A-I intron -    22028664 chr9:37863255(+) A-I intron -    22028664 chr9:37863267(+) A-I intron -    22028664 chr9:37863268(+) A-I intron -    22028664 chr9:37863273(+) A-I intron -    22028664 chr9:37863283(+) A-I intron -    22028664 chr9:37863298(+) A-I intron -    22028664 chr9:37863307(+) A-I intron -    22028664 chr9:37863062(+) T-C intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DCAF10	chr9:37800799-37800800(+) m6A 5'UTR//intron       24981863 chr9:37801164-37801165(+) m6A CDS//intron       - chr9:37801278-37801279(+) m6A CDS//intron       24209618//25456834//22608085 chr9:37801290-37801291(+) m6A CDS//intron       24209618//25456834//22608085 chr9:37801338-37801339(+) m6A CDS//intron       24209618//25456834 chr9:37860110-37860111(+) m6A CDS//exon       24284625//24209618//22608085 chr9:37860230-37860231(+) m6A exon//intron       24284625//24209618//25456834//27773535//22608085 chr9:37860376-37860377(+) m6A exon//intron       24284625//24981863//27773535//22608085 chr9:37861255-37861256(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:37861330-37861331(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:37861342-37861343(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:37861528-37861529(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr9:37861635-37861636(+) m6A 3'UTR//exon       24284625 chr9:37861693-37861694(+) m6A 3'UTR//exon       24284625 chr9:37861752-37861753(+) m6A 3'UTR//exon       24284625 chr9:37863757-37863758(+) m6A 3'UTR       27773535 chr9:37863799-37863800(+) m6A 3'UTR       27773535 chr9:37865162-37865163(+) m6A 3'UTR       24981863 chr9:37865199-37865200(+) m6A 3'UTR       24981863 chr9:37865268-37865269(+) m6A 3'UTR       24981863//27773535 chr9:37865310-37865311(+) m6A 3'UTR       24981863 chr9:37865320-37865321(+) m6A 3'UTR       24981863 chr9:37866804-37866805(+) m6A 3'UTR       24981863 chr9:37866913-37866914(+) m6A 3'UTR       24981863 chr9:37867155-37867156(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DCAF10	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: DCAF10

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg