Basic Information:

  VIRBase ID:  

VHID00172108

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          MRPL14:  NM_001318770     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	MRPL14
miRBase Accession/Entrez ID	MIMAT0014352	64928
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	L14mt//L32mt//MRP-L14//MRP-L32//MRPL32//RMPL32//RPML32

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MRPL14	chr6:44086514(-) A-I      intronic chr6:44089994(-) A-I      intronic chr6:44090092(-) A-I      intronic chr6:44090021(-) A-I      intronic chr6:44089549(-) A-I      intronic chr6:44085477(-) A-I      intronic chr6:44086662(-) A-I      intronic chr6:44085530(-) A-I      intronic chr6:44089607(-) A-I      intronic chr6:44089565(-) A-I      intronic chr6:44086577(-) A-I      intronic chr6:44085623(-) A-I      intronic chr6:44085651(-) A-I      intronic chr6:44085627(-) A-I      intronic chr6:44085523(-) A-I      intronic chr6:44089511(-) A-I      intronic chr6:44089600(-) A-I      intronic chr6:44085504(-) A-I      intronic chr6:44091486(-) A-I      intronic chr6:44089432(-) A-I      intronic chr6:44086618(-) A-I      intronic chr6:44086589(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MRPL14	chr6:44086618(-) A-G intron -    22484847 chr6:44086662(-) A-G intron -    22484847 chr6:44089600(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPL14	chr6:44081527-44081528(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:44081552-44081553(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:44081589-44081590(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:44081656-44081657(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:44081668-44081669(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:44081679-44081680(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:44081688-44081689(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:44081780-44081781(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:44081874-44081875(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr6:44081892-44081893(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MRPL14	Chromatin K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: MRPL14

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg