Detail Information

Basic Information:


  VIRBase ID:  

VHID00170043

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:           NR0B2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H9-3p NR0B2
miRBase
Accession/Entrez ID
MIMAT0014352 8431
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - SHP//SHP1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NR0B2
chr1:27237982-27237983(-) m6A 3'UTR       27773535
chr1:27238022-27238023(-) m6A 3'UTR       27773535
chr1:27238050-27238051(-) m6A 3'UTR       27773535
chr1:27238099-27238100(-) m6A 3'UTR       27773535
chr1:27238157-27238158(-) m6A 3'UTR       24981863//27773535
chr1:27238172-27238173(-) m6A 3'UTR       24981863//27773535
chr1:27238204-27238205(-) m6A 3'UTR       24981863//27773535
chr1:27238225-27238226(-) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NR0B2
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H9-3p
Interactor2: NR0B2

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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