Basic Information:

  VIRBase ID:  

VHID00169272

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          LFNG:  NM_001040167     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	LFNG
miRBase Accession/Entrez ID	MIMAT0014352	3955
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SCDO3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LFNG	chr7:2559855-2559856(+) m6A CDS//intron       - chr7:2559900-2559901(+) m6A CDS//intron       - chr7:2567761-2567762(+) m6A 3'UTR//intron       - chr7:2567772-2567773(+) m6A 3'UTR//intron       - chr7:2567808-2567809(+) m6A 3'UTR//intron       - chr7:2567850-2567851(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LFNG	Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: LFNG

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg