Basic Information:

  VIRBase ID:  

VHID00168610

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H9-3p:  MIMAT0014352          BCL6:  NM_001134738     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H9-3p	BCL6
miRBase Accession/Entrez ID	MIMAT0014352	604
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BCL5//BCL6A//LAZ3//ZBTB27//ZNF51

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BCL6	chr3:187442376-187442377(-) m6A exon//intron       27773535 chr3:187442435-187442436(-) m6A exon//intron       27773535 chr3:187443309-187443310(-) m6A 3'UTR//CDS//exon       27773535 chr3:187443354-187443355(-) m6A 3'UTR//CDS//exon       27773535 chr3:187443409-187443410(-) m6A 3'UTR//CDS//exon       27773535 chr3:187444530-187444531(-) m6A 3'UTR//CDS//intron       27773535 chr3:187444594-187444595(-) m6A 3'UTR//CDS//intron       27773535 chr3:187444608-187444609(-) m6A 3'UTR//CDS//intron       27773535 chr3:187446177-187446178(-) m6A 3'UTR//CDS       27773535 chr3:187446882-187446883(-) m6A 3'UTR//CDS       24284625//27773535//27371828 chr3:187446927-187446928(-) m6A 3'UTR//CDS       24284625//27773535//27371828 chr3:187447019-187447020(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828 chr3:187447221-187447222(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535 chr3:187447277-187447278(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535 chr3:187447284-187447285(-) m1A 3'UTR//CDS       26863196 chr3:187447346-187447347(-) m6A 3'UTR//CDS       24284625//24981863//27773535 chr3:187447402-187447403(-) m6A 3'UTR//CDS       24284625//24981863//27773535 chr3:187447698-187447699(-) m6A 3'UTR//CDS       27773535 chr3:187447734-187447735(-) m6A 3'UTR//CDS       27773535 chr3:187451485-187451486(-) m6A 5'UTR//exon       27371828 chr3:187463203-187463204(-) m6A 5'UTR//exon       - chr3:187463252-187463253(-) m6A 5'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BCL6	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H9-3p
Interactor2: BCL6

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg