Basic Information:

  VIRBase ID:  

VHID00168356

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          ARPIN:  NM_001282380     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	ARPIN
miRBase Accession/Entrez ID	MIMAT0014351	348110
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C15orf38

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARPIN	chr15:90444645(-) A-I      3'UTR chr15:90444675(-) A-I      3'UTR chr15:90444731(-) A-I      3'UTR chr15:90444713(-) A-I      3'UTR chr15:90444694(-) A-I      3'UTR chr15:90444689(-) A-I      3'UTR chr15:90444693(-) A-I      3'UTR chr15:90444654(-) A-I      3'UTR chr15:90444708(-) A-I      3'UTR chr15:90444706(-) A-I      3'UTR chr15:90444668(-) A-I      3'UTR chr15:90444652(-) A-I      3'UTR chr15:90444728(-) A-I      3'UTR chr15:90444746(-) A-I      3'UTR chr15:90444685(-) A-I      3'UTR chr15:90444667(-) A-I      3'UTR chr15:90444707(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARPIN	chr15:90443637-90443638(-) m6A 3'UTR       27773535 chr15:90443729-90443730(-) m6A 3'UTR       27773535 chr15:90443934-90443935(-) m6A 3'UTR       24981863//22608085 chr15:90443964-90443965(-) m6A 3'UTR       24981863 chr15:90444009-90444010(-) m6A 3'UTR       24981863 chr15:90444542-90444543(-) m6A 3'UTR       24284625//27773535 chr15:90444561-90444562(-) m6A 3'UTR       24284625 chr15:90444569-90444570(-) m6A 3'UTR       24284625 chr15:90444697-90444698(-) m6A 3'UTR       24284625 chr15:90444705-90444706(-) m6A 3'UTR       24284625 chr15:90444860-90444861(-) m6A 3'UTR       24284625//24981863//27773535//27773536 chr15:90444865-90444866(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27773536 chr15:90444880-90444881(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27773536 chr15:90444937-90444938(-) m6A 3'UTR       24284625//24209618//24981863//27773536 chr15:90444961-90444962(-) m6A 3'UTR       24284625//24209618//24981863//27773536 chr15:90444976-90444977(-) m6A 3'UTR       24284625//24209618//24981863//27773536 chr15:90446105-90446106(-) m6A 3'UTR//intron       24981863//27773536 chr15:90446233-90446234(-) m6A 3'UTR//intron       27773535 chr15:90446256-90446257(-) m6A 3'UTR//intron       27773535 chr15:90446318-90446319(-) m6A 3'UTR//intron       27773535 chr15:90446533-90446534(-) m6A CDS       24284625//24209618//24981863//27773535 chr15:90446548-90446549(-) m6A CDS       24284625//24209618//24981863//27773535 chr15:90446584-90446585(-) m6A CDS       24284625//24209618//27773535//27773536 chr15:90446597-90446598(-) m6A CDS       24209618//27773535//27773536 chr15:90447032-90447033(-) m6A CDS       24284625//24209618//27773535//27773536 chr15:90447063-90447064(-) m6A CDS       24284625//24209618//27773536 chr15:90447196-90447197(-) m6A CDS       27773536 chr15:90451537-90451538(-) m6A 5'UTR//CDS       27773536 chr15:90453991-90453992(-) m6A 5'UTR//CDS       24284625//27773536 chr15:90454023-90454024(-) m6A 5'UTR//CDS       24284625//27371828//27773536 chr15:90455350-90455351(-) m6A 5'UTR//intron       27371828 chr15:90455354-90455355(-) m6A 5'UTR//intron       27773536 chr15:90455371-90455372(-) m6A 5'UTR//intron       27773536 chr15:90455388-90455389(-) m6A 5'UTR//intron       27773536 chr15:90455478-90455479(-) m6A 5'UTR//intron       24209618//22608085 chr15:90455571-90455572(-) m6A 5'UTR//intron       25456834//27773536//22608085 chr15:90455594-90455595(-) m6A 5'UTR//intron       25456834//27773536//22608085 chr15:90455617-90455618(-) m6A 5'UTR//intron       25456834//27773536//22608085 chr15:90455650-90455651(-) m6A 5'UTR//intron       24209618//27773536//22608085 chr15:90455718-90455719(-) m6A 5'UTR//intron       24209618 chr15:90455993-90455994(-) m6A CDS       24284625//24209618//24981863//27371828//27773536 chr15:90456032-90456033(-) m6A CDS       24284625//24209618//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	ARPIN	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: ARPIN

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg