Basic Information:

  VIRBase ID:  

VHID00168340

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          NRBP2:  NM_178564     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	NRBP2
miRBase Accession/Entrez ID	MIMAT0014351	340371
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	pp9320//TRG16

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NRBP2	chr8:144915925-144915926(-) m6A 3'UTR//exon       27773535 chr8:144915930-144915931(-) m6A 3'UTR//exon       27773535 chr8:144915997-144915998(-) m6A 3'UTR//exon       27773535 chr8:144916010-144916011(-) m6A 3'UTR//exon       27773535 chr8:144916162-144916163(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916173-144916174(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916229-144916230(-) Y 3'UTR//exon       26075521 chr8:144916235-144916236(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916270-144916271(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916288-144916289(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916301-144916302(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916372-144916373(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916394-144916395(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916417-144916418(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916514-144916515(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916602-144916603(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr8:144916653-144916654(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916710-144916711(-) Y 3'UTR//exon       26075521 chr8:144916720-144916721(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr8:144916831-144916832(-) m6A 3'UTR//exon       24284625//27773535 chr8:144916860-144916861(-) m6A 3'UTR//exon       24284625//27773535 chr8:144917061-144917062(-) m6A 3'UTR//exon       24284625//24981863//27773535 chr8:144917086-144917087(-) m6A 3'UTR//exon       24284625//24981863//27773535 chr8:144917178-144917179(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828 chr8:144917184-144917185(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828 chr8:144917284-144917285(-) m6A 3'UTR//exon       24284625//27773535 chr8:144917288-144917289(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr8:144917302-144917303(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr8:144917380-144917381(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr8:144917429-144917430(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr8:144917448-144917449(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536 chr8:144917487-144917488(-) m6A 3'UTR//exon       24284625//24981863//27371828//27773536 chr8:144917587-144917588(-) m6A 3'UTR//exon       27773536 chr8:144917702-144917703(-) m6A 3'UTR//CDS//exon       25456834//27371828//27773536 chr8:144917768-144917769(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536 chr8:144917808-144917809(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536 chr8:144917842-144917843(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536 chr8:144918029-144918030(-) m6A CDS//exon//intron       27773536 chr8:144918041-144918042(-) m6A CDS//exon//intron       27773536 chr8:144918174-144918175(-) m6A CDS//exon       24284625//27773536 chr8:144918233-144918234(-) m6A exon//intron       27773536 chr8:144918312-144918313(-) m6A CDS//exon       27773536 chr8:144919218-144919219(-) m6A CDS//exon       27773536 chr8:144919248-144919249(-) m6A CDS//exon       27773536 chr8:144919322-144919323(-) m6A CDS//exon       27773536 chr8:144919441-144919442(-) m6A CDS//exon       27773536 chr8:144919635-144919636(-) m6A CDS//exon       27773536 chr8:144919648-144919649(-) m6A CDS//exon       27773536 chr8:144919898-144919899(-) m6A CDS//exon       27773536 chr8:144919986-144919987(-) m6A exon//intron       27773536 chr8:144921541-144921542(-) m6A CDS//exon       27773536 chr8:144921813-144921814(-) m6A exon//intron       27773536 chr8:144921847-144921848(-) m6A exon//intron       27773536 chr8:144921875-144921876(-) m6A exon//intron       27371828//27773536 chr8:144921929-144921930(-) m6A CDS//exon       27773535//27371828 chr8:144921939-144921940(-) m6A CDS//exon       27773535//27371828 chr8:144922035-144922036(-) m6A exon//intron       27773535//27371828//27773536 chr8:144922067-144922068(-) m6A exon//intron       27371828//27773536 chr8:144922152-144922153(-) m6A CDS//exon       27371828//27773536 chr8:144922161-144922162(-) m6A CDS//exon       24209618//27371828//27773536 chr8:144922189-144922190(-) m6A CDS//exon       24209618//27371828//27773536 chr8:144922303-144922304(-) m6A CDS//exon       24209618//27371828//27773536 chr8:144922351-144922352(-) m6A CDS//exon       24209618//27371828//27773536 chr8:144922387-144922388(-) m6A 5'UTR//CDS//exon       27371828//27773536 chr8:144922396-144922397(-) m6A 5'UTR//CDS//exon       27371828//27773536 chr8:144922607-144922608(-) m6A 5'UTR//intron       - chr8:144922699-144922700(-) m6A 5'UTR//intron       27773536 chr8:144922727-144922728(-) m6A 5'UTR//intron       27773536 chr8:144922771-144922772(-) m6A 5'UTR//intron       24209618//27773536 chr8:144923008-144923009(-) m6A 5'UTR//exon       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	NRBP2	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: NRBP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg