Basic Information:

  VIRBase ID:  

VHID00168281

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          TIPRL:  NM_001031800     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	TIPRL
miRBase Accession/Entrez ID	MIMAT0014351	261726
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	TIP//TIP41//TIPRL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TIPRL	chr1:168164923(+) A-I      intronic chr1:168158865(+) A-I      intronic chr1:168151115(+) A-I      intronic chr1:168158863(+) A-I      intronic chr1:168151198(+) A-I      intronic chr1:168150284(+) A-I      intronic chr1:168158720(+) A-I      intronic chr1:168158108(+) A-I      intronic chr1:168151635(+) A-I      intronic chr1:168166875(+) A-I      intronic chr1:168157988(+) A-I      intronic chr1:168154996(+) A-I      intronic chr1:168158866(+) A-I      intronic chr1:168154990(+) A-I      intronic chr1:168151246(+) A-I      intronic chr1:168154958(+) A-I      intronic chr1:168150537(+) A-I      intronic chr1:168150350(+) A-I      intronic chr1:168150586(+) A-I      intronic chr1:168151668(+) A-I      intronic chr1:168162329(+) A-I      intronic chr1:168166356(+) A-I      intronic chr1:168150483(+) A-I      intronic chr1:168150726(+) A-I      intronic chr1:168162044(+) A-I      intronic chr1:168151809(+) A-I      intronic chr1:168150724(+) A-I      intronic chr1:168151098(+) A-I      intronic chr1:168158767(+) A-I      intronic chr1:168150290(+) A-I      intronic chr1:168151609(+) A-I      intronic chr1:168151113(+) A-I      intronic chr1:168158099(+) A-I      intronic chr1:168166944(+) A-I      intronic chr1:168151835(+) A-I      intronic chr1:168151814(+) A-I      intronic chr1:168151223(+) A-I      intronic chr1:168150733(+) A-I      intronic chr1:168155950(+) A-I      intronic chr1:168157956(+) A-I      intronic chr1:168165064(+) A-I      intronic chr1:168166897(+) A-I      intronic chr1:168166432(+) A-I      intronic chr1:168151813(+) A-I      intronic chr1:168158039(+) A-I      intronic chr1:168151123(+) A-I      intronic chr1:168164977(+) A-I      intronic chr1:168151100(+) A-I      intronic chr1:168150730(+) A-I      intronic chr1:168158713(+) A-I      intronic chr1:168156951(+) A-I      intronic chr1:168150685(+) A-I      intronic chr1:168151122(+) A-I      intronic chr1:168150579(+) A-I      intronic chr1:168150136(+) A-I      intronic chr1:168151272(+) A-I      intronic chr1:168150632(+) A-I      intronic chr1:168150198(+) A-I      intronic chr1:168150531(+) A-I      intronic chr1:168166458(+) A-I      intronic chr1:168151044(+) A-I      intronic chr1:168151708(+) A-I      intronic chr1:168166414(+) A-I      intronic chr1:168150252(+) A-I      intronic chr1:168166283(+) A-I      intronic chr1:168150321(+) A-I      intronic chr1:168166858(+) A-I      intronic chr1:168151234(+) A-I      intronic chr1:168166452(+) A-I      intronic chr1:168150712(+) A-I      intronic chr1:168151137(+) A-I      intronic chr1:168160869(+) A-I      intronic chr1:168167000(+) A-I      intronic chr1:168151289(+) A-I      intronic chr1:168166884(+) A-I      intronic chr1:168151756(+) A-I      intronic chr1:168150670(+) A-I      intronic chr1:168150360(+) A-I      intronic chr1:168164976(+) A-I      intronic chr1:168151182(+) A-I      intronic chr1:168166288(+) A-I      intronic chr1:168158764(+) A-I      intronic chr1:168151043(+) A-I      intronic chr1:168166099(+) A-I      intronic chr1:168151799(+) A-I      intronic chr1:168150732(+) A-I      intronic chr1:168150692(+) A-I      intronic chr1:168150507(+) A-I      intronic chr1:168150589(+) A-I      intronic chr1:168152905(+) A-I      intronic chr1:168150244(+) A-I      intronic chr1:168160902(+) A-I      intronic chr1:168150182(+) A-I      intronic chr1:168151743(+) A-I      intronic chr1:168166465(+) A-I      intronic chr1:168151217(+) A-I      intronic chr1:168151744(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TIPRL	chr1:168169847(+) A-T intron -    22484847 chr1:168150244(+) A-G intron -    22484847 chr1:168150507(+) A-G intron -    22484847 chr1:168150531(+) A-G intron -    22484847 chr1:168150579(+) A-G intron -    22484847 chr1:168151122(+) A-G intron -    22484847 chr1:168151182(+) A-G intron -    22484847 chr1:168151217(+) A-G intron -    22484847 chr1:168158039(+) A-G intron -    22484847 chr1:168160869(+) A-G intron -    22484847 chr1:168165064(+) A-G intron -    22484847 chr1:168166288(+) A-G intron -    22484847 chr1:168166461(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TIPRL	chr1:168148249-168148250(+) m6A 5'UTR       24284625//24981863 chr1:168154028-168154029(+) m6A CDS       24981863 chr1:168154049-168154050(+) m6A CDS       24981863 chr1:168154062-168154063(+) m6A CDS       24981863 chr1:168165867-168165868(+) m6A CDS       24284625//24981863 chr1:168168165-168168166(+) m6A CDS       24284625//24981863 chr1:168169166-168169167(+) m6A CDS       24284625//24981863//27773535 chr1:168169255-168169256(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr1:168169323-168169324(+) m6A 3'UTR       24284625//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	TIPRL	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: TIPRL

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg