Basic Information:

  VIRBase ID:  

VHID00168245

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          FAM171A1:  NM_001010924     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	FAM171A1
miRBase Accession/Entrez ID	MIMAT0014351	221061
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	APCN//C10orf38

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM171A1	chr10:15260717(-) A-I      intronic chr10:15260722(-) A-I      intronic chr10:15260846(-) A-I      intronic chr10:15277057(-) A-I      intronic chr10:15277064(-) A-I      intronic chr10:15277106(-) A-I      intronic chr10:15286271(-) A-I      intronic chr10:15287176(-) A-I      intronic chr10:15287205(-) A-I      intronic chr10:15302005(-) A-I      intronic chr10:15302027(-) A-I      intronic chr10:15304002(-) A-I      intronic chr10:15306166(-) A-I      intronic chr10:15347455(-) A-I      intronic chr10:15306167(-) A-I      intronic chr10:15306174(-) A-I      intronic chr10:15379745(-) A-I      intronic chr10:15347413(-) A-I      intronic chr10:15347428(-) A-I      intronic chr10:15259748(-) A-I      intronic chr10:15306184(-) A-I      intronic chr10:15259769(-) A-I      intronic chr10:15306189(-) A-I      intronic chr10:15259805(-) A-I      intronic chr10:15259820(-) A-I      intronic chr10:15260253(-) A-I      intronic chr10:15260255(-) A-I      intronic chr10:15365079(-) A-I      intronic chr10:15286302(-) A-I      intronic chr10:15269520(-) A-I      intronic chr10:15307562(-) A-I      intronic chr10:15389669(-) A-I      intronic chr10:15369522(-) A-I      intronic chr10:15288796(-) A-I      intronic chr10:15303873(-) A-I      intronic chr10:15260841(-) A-I      intronic chr10:15339142(-) A-I      intronic chr10:15308785(-) A-I      intronic chr10:15261276(-) A-I      intronic chr10:15398846(-) A-I      intronic chr10:15398956(-) A-I      intronic chr10:15307446(-) A-I      intronic chr10:15275272(-) A-I      intronic chr10:15265889(-) A-I      intronic chr10:15261181(-) A-I      intronic chr10:15332923(-) A-I      intronic chr10:15286340(-) A-I      intronic chr10:15282867(-) A-I      intronic chr10:15409008(-) A-I      intronic chr10:15269136(-) A-I      intronic chr10:15270376(-) A-I      intronic chr10:15372806(-) A-I      intronic chr10:15347458(-) A-I      intronic chr10:15269546(-) A-I      intronic chr10:15306188(-) A-I      intronic chr10:15378967(-) A-I      intronic chr10:15276762(-) A-I      intronic chr10:15344943(-) A-I      intronic chr10:15277218(-) A-I      intronic chr10:15397513(-) A-I      intronic chr10:15390181(-) A-I      intronic chr10:15273475(-) A-I      intronic chr10:15303914(-) A-I      intronic chr10:15400067(-) A-I      intronic chr10:15326687(-) A-I      intronic chr10:15306773(-) A-I      intronic chr10:15304073(-) A-I      intronic chr10:15287173(-) A-I      intronic chr10:15261280(-) A-I      intronic chr10:15260190(-) A-I      intronic chr10:15281581(-) A-I      intronic chr10:15333014(-) A-I      intronic chr10:15301940(-) A-I      intronic chr10:15400123(-) A-I      intronic chr10:15369644(-) A-I      intronic chr10:15389687(-) A-I      intronic chr10:15292721(-) A-I      intronic chr10:15287157(-) A-I      intronic chr10:15400247(-) A-I      intronic chr10:15306118(-) A-I      intronic chr10:15306682(-) A-I      intronic chr10:15281497(-) A-I      intronic chr10:15281496(-) A-I      intronic chr10:15297848(-) A-I      intronic chr10:15390160(-) A-I      intronic chr10:15354834(-) A-I      intronic chr10:15286278(-) A-I      intronic chr10:15273405(-) A-I      intronic chr10:15379107(-) A-I      intronic chr10:15288661(-) A-I      intronic chr10:15288659(-) A-I      intronic chr10:15276780(-) A-I      intronic chr10:15286272(-) A-I      intronic chr10:15401950(-) A-I      intronic chr10:15297865(-) A-I      intronic chr10:15307455(-) A-I      intronic chr10:15372291(-) A-I      intronic chr10:15401966(-) A-I      intronic chr10:15286245(-) A-I      intronic chr10:15401969(-) A-I      intronic chr10:15297871(-) A-I      intronic chr10:15402111(-) A-I      intronic chr10:15361534(-) A-I      intronic chr10:15281495(-) A-I      intronic chr10:15297911(-) A-I      intronic chr10:15309519(-) A-I      intronic chr10:15259850(-) A-I      intronic chr10:15281391(-) A-I      intronic chr10:15402131(-) A-I      intronic chr10:15270439(-) A-I      intronic chr10:15390273(-) A-I      intronic chr10:15306092(-) A-I      intronic chr10:15368806(-) A-I      intronic chr10:15297768(-) A-I      intronic chr10:15304044(-) A-I      intronic chr10:15306580(-) A-I      intronic chr10:15408275(-) A-I      intronic chr10:15269655(-) A-I      intronic chr10:15347652(-) A-I      intronic chr10:15288812(-) A-I      intronic chr10:15379785(-) A-I      intronic chr10:15408322(-) A-I      intronic chr10:15306142(-) A-I      intronic chr10:15277255(-) A-I      intronic chr10:15408323(-) A-I      intronic chr10:15297779(-) A-I      intronic chr10:15321751(-) A-I      intronic chr10:15286291(-) A-I      intronic chr10:15307466(-) A-I      intronic chr10:15319354(-) A-I      intronic chr10:15259739(-) A-I      intronic chr10:15273401(-) A-I      intronic chr10:15261198(-) A-I      intronic chr10:15341868(-) A-I      intronic chr10:15341869(-) A-I      intronic chr10:15297919(-) A-I      intronic chr10:15397242(-) A-I      intronic chr10:15273359(-) A-I      intronic chr10:15408408(-) A-I      intronic chr10:15304030(-) A-I      intronic chr10:15404560(-) A-I      intronic chr10:15317551(-) A-I      intronic chr10:15343264(-) A-I      intronic chr10:15307383(-) A-I      intronic chr10:15269550(-) A-I      intronic chr10:15259735(-) A-I      intronic chr10:15343421(-) A-I      intronic chr10:15274061(-) A-I      intronic chr10:15288561(-) A-I      intronic chr10:15265695(-) A-I      intronic chr10:15339195(-) A-I      intronic chr10:15265680(-) A-I      intronic chr10:15372312(-) A-I      intronic chr10:15306075(-) A-I      intronic chr10:15348460(-) A-I      intronic chr10:15304038(-) A-I      intronic chr10:15281433(-) A-I      intronic chr10:15286135(-) A-I      intronic chr10:15307490(-) A-I      intronic chr10:15402114(-) A-I      intronic chr10:15265663(-) A-I      intronic chr10:15261757(-) A-I      intronic chr10:15372275(-) A-I      intronic chr10:15368496(-) A-I      intronic chr10:15273296(-) A-I      intronic chr10:15349993(-) A-I      intronic chr10:15394015(-) A-I      intronic chr10:15273218(-) A-I      intronic chr10:15277165(-) A-I      intronic chr10:15373000(-) A-I      intronic chr10:15333044(-) A-I      intronic chr10:15397651(-) A-I      intronic chr10:15344966(-) A-I      intronic chr10:15261255(-) A-I      intronic chr10:15261110(-) A-I      intronic chr10:15276682(-) A-I      intronic chr10:15260677(-) A-I      intronic chr10:15373088(-) A-I      intronic chr10:15286021(-) A-I      intronic chr10:15373126(-) A-I      intronic chr10:15261099(-) A-I      intronic chr10:15261012(-) A-I      intronic chr10:15397243(-) A-I      intronic chr10:15379914(-) A-I      intronic chr10:15306116(-) A-I      intronic chr10:15287317(-) A-I      intronic chr10:15325783(-) A-I      intronic chr10:15260861(-) A-I      intronic chr10:15287308(-) A-I      intronic chr10:15300156(-) A-I      intronic chr10:15286013(-) A-I      intronic chr10:15260813(-) A-I      intronic chr10:15258568(-) A-I      intronic chr10:15297811(-) A-I      intronic chr10:15261019(-) A-I      intronic chr10:15350093(-) A-I      intronic chr10:15260705(-) A-I      intronic chr10:15297656(-) A-I      intronic chr10:15260283(-) A-I      intronic chr10:15273481(-) A-I      intronic chr10:15274083(-) A-I      intronic chr10:15285991(-) A-I      intronic chr10:15300306(-) A-I      intronic chr10:15285970(-) A-I      intronic chr10:15297920(-) A-I      intronic chr10:15288688(-) A-I      intronic chr10:15297817(-) A-I      intronic chr10:15286512(-) A-I      intronic chr10:15260274(-) A-I      intronic chr10:15379949(-) A-I      intronic chr10:15260273(-) A-I      intronic chr10:15260822(-) A-I      intronic chr10:15261025(-) A-I      intronic chr10:15259722(-) A-I      intronic chr10:15339196(-) A-I      intronic chr10:15397244(-) A-I      intronic chr10:15397551(-) A-I      intronic chr10:15283006(-) A-I      intronic chr10:15282948(-) A-I      intronic chr10:15259697(-) A-I      intronic chr10:15259689(-) A-I      intronic chr10:15286118(-) A-I      intronic chr10:15282919(-) A-I      intronic chr10:15292707(-) A-I      intronic chr10:15282319(-) A-I      intronic chr10:15297823(-) A-I      intronic chr10:15287292(-) A-I      intronic chr10:15397568(-) A-I      intronic chr10:15273375(-) A-I      intronic chr10:15300310(-) A-I      intronic chr10:15297840(-) A-I      intronic chr10:15292676(-) A-I      intronic chr10:15392921(-) A-I      intronic chr10:15307514(-) A-I      intronic chr10:15384559(-) A-I      intronic chr10:15282303(-) A-I      intronic chr10:15282297(-) A-I      intronic chr10:15332213(-) A-I      intronic chr10:15261037(-) A-I      intronic chr10:15390269(-) A-I      intronic chr10:15368771(-) A-I      intronic chr10:15307394(-) A-I      intronic chr10:15377160(-) A-I      intronic chr10:15396432(-) A-I      intronic chr10:15334672(-) A-I      intronic chr10:15289308(-) A-I      intronic chr10:15374227(-) A-I      intronic chr10:15259848(-) A-I      intronic chr10:15323738(-) A-I      intronic chr10:15260731(-) A-I      intronic chr10:15372209(-) A-I      intronic chr10:15260217(-) A-I      intronic chr10:15265776(-) A-I      intronic chr10:15371513(-) A-I      intronic chr10:15297758(-) A-I      intronic chr10:15287163(-) A-I      intronic chr10:15408392(-) A-I      intronic chr10:15261094(-) A-I      intronic chr10:15403600(-) A-I      intronic chr10:15261194(-) A-I      intronic chr10:15274024(-) A-I      intronic chr10:15284668(-) A-I      intronic chr10:15292683(-) A-I      intronic chr10:15285975(-) A-I      intronic chr10:15287193(-) A-I      intronic chr10:15301890(-) A-I      intronic chr10:15306658(-) A-I      intronic chr10:15306699(-) A-I      intronic chr10:15277124(-) A-I      intronic chr10:15307429(-) A-I      intronic chr10:15259902(-) A-I      intronic chr10:15306070(-) A-I      intronic chr10:15277126(-) A-I      intronic chr10:15332061(-) A-I      intronic chr10:15279009(-) A-I      intronic chr10:15352601(-) A-I      intronic chr10:15365056(-) A-I      intronic chr10:15277201(-) A-I      intronic chr10:15304100(-) A-I      intronic chr10:15273873(-) A-I      intronic chr10:15261237(-) A-I      intronic chr10:15306581(-) A-I      intronic chr10:15261124(-) A-I      intronic chr10:15269599(-) A-I      intronic chr10:15286350(-) A-I      intronic chr10:15278970(-) A-I      intronic chr10:15307356(-) A-I      intronic chr10:15306240(-) A-I      intronic chr10:15297743(-) A-I      intronic chr10:15260845(-) A-I      intronic chr10:15261157(-) A-I      intronic chr10:15288802(-) A-I      intronic chr10:15370418(-) A-I      intronic chr10:15297762(-) A-I      intronic chr10:15329370(-) A-I      intronic chr10:15368864(-) A-I      intronic chr10:15260646(-) A-I      intronic chr10:15334601(-) A-I      intronic chr10:15277065(-) A-I      intronic chr10:15306170(-) A-I      intronic chr10:15286189(-) A-I      intronic chr10:15347630(-) A-I      intronic chr10:15301932(-) A-I      intronic chr10:15368550(-) A-I      intronic chr10:15397472(-) A-I      intronic chr10:15261195(-) A-I      intronic chr10:15365053(-) A-I      intronic chr10:15274009(-) A-I      intronic chr10:15281528(-) A-I      intronic chr10:15273286(-) A-I      intronic chr10:15306083(-) A-I      intronic chr10:15408256(-) A-I      intronic chr10:15352739(-) A-I      intronic chr10:15398842(-) A-I      intronic chr10:15284578(-) A-I      intronic chr10:15273444(-) A-I      intronic chr10:15286232(-) A-I      intronic chr10:15392901(-) A-I      intronic chr10:15311369(-) A-I      intronic chr10:15309539(-) A-I      intronic chr10:15273300(-) A-I      intronic chr10:15403502(-) A-I      intronic chr10:15260880(-) A-I      intronic chr10:15286186(-) A-I      intronic chr10:15389691(-) A-I      intronic chr10:15408257(-) A-I      intronic chr10:15270521(-) A-I      intronic chr10:15392481(-) A-I      intronic chr10:15276856(-) A-I      intronic chr10:15409033(-) A-I      intronic chr10:15409086(-) A-I      intronic chr10:15260745(-) A-I      intronic chr10:15390251(-) A-I      intronic chr10:15409076(-) A-I      intronic chr10:15306660(-) A-I      intronic chr10:15390154(-) A-I      intronic chr10:15291207(-) A-I      intronic chr10:15285831(-) A-I      intronic chr10:15282836(-) A-I      intronic chr10:15259774(-) A-I      intronic chr10:15292510(-) A-I      intronic chr10:15261159(-) A-I      intronic chr10:15329347(-) A-I      intronic chr10:15259775(-) A-I      intronic chr10:15301917(-) A-I      intronic chr10:15273821(-) A-I      intronic chr10:15261164(-) A-I      intronic chr10:15260867(-) A-I      intronic chr10:15311391(-) A-I      intronic chr10:15373065(-) A-I      intronic chr10:15380802(-) A-I      intronic chr10:15265694(-) A-I      intronic chr10:15307519(-) A-I      intronic chr10:15390155(-) A-I      intronic chr10:15310965(-) A-I      intronic chr10:15389580(-) A-I      intronic chr10:15390007(-) A-I      intronic chr10:15306197(-) A-I      intronic chr10:15260164(-) A-I      intronic chr10:15260636(-) A-I      intronic chr10:15288637(-) A-I      intronic chr10:15278976(-) A-I      intronic chr10:15273439(-) A-I      intronic chr10:15273397(-) A-I      intronic chr10:15269064(-) A-I      intronic chr10:15341121(-) A-I      intronic chr10:15273428(-) A-I      intronic chr10:15260151(-) A-I      intronic chr10:15265121(-) A-I      intronic chr10:15374187(-) A-I      intronic chr10:15260732(-) A-I      intronic chr10:15273839(-) A-I      intronic chr10:15283010(-) A-I      intronic chr10:15286352(-) A-I      intronic chr10:15371530(-) A-I      intronic chr10:15302082(-) A-I      intronic chr10:15331093(-) A-I      intronic chr10:15297775(-) A-I      intronic chr10:15341865(-) A-I      intronic chr10:15347500(-) A-I      intronic chr10:15304027(-) A-I      intronic chr10:15307432(-) A-I      intronic chr10:15407525(-) A-I      intronic chr10:15306110(-) A-I      intronic chr10:15309566(-) A-I      intronic chr10:15277088(-) A-I      intronic chr10:15261242(-) A-I      intronic chr10:15347501(-) A-I      intronic chr10:15307502(-) A-I      intronic chr10:15284703(-) A-I      intronic chr10:15317571(-) A-I      intronic chr10:15285888(-) A-I      intronic chr10:15306573(-) A-I      intronic chr10:15307409(-) A-I      intronic chr10:15270522(-) A-I      intronic chr10:15273363(-) A-I      intronic chr10:15346983(-) A-I      intronic chr10:15352749(-) A-I      intronic chr10:15306748(-) A-I      intronic chr10:15261229(-) A-I      intronic chr10:15273980(-) A-I      intronic chr10:15407536(-) A-I      intronic chr10:15371614(-) A-I      intronic chr10:15403599(-) A-I      intronic chr10:15260351(-) A-I      intronic chr10:15297784(-) A-I      intronic chr10:15352643(-) A-I      intronic chr10:15397155(-) A-I      intronic chr10:15273331(-) A-I      intronic chr10:15354859(-) A-I      intronic chr10:15393793(-) A-I      intronic chr10:15390009(-) A-I      intronic chr10:15273840(-) A-I      intronic chr10:15392433(-) A-I      intronic chr10:15372784(-) A-I      intronic chr10:15389611(-) A-I      intronic chr10:15408374(-) A-I      intronic chr10:15261199(-) A-I      intronic chr10:15311337(-) A-I      intronic chr10:15343395(-) A-I      intronic chr10:15407522(-) A-I      intronic chr10:15306254(-) A-I      intronic chr10:15302019(-) A-I      intronic chr10:15307393(-) A-I      intronic chr10:15309490(-) A-I      intronic chr10:15286246(-) A-I      intronic chr10:15321834(-) A-I      intronic chr10:15286222(-) A-I      intronic chr10:15286127(-) A-I      intronic chr10:15392780(-) A-I      intronic chr10:15390141(-) A-I      intronic chr10:15292697(-) A-I      intronic chr10:15260662(-) A-I      intronic chr10:15408391(-) A-I      intronic chr10:15408278(-) A-I      intronic chr10:15303857(-) A-I      intronic chr10:15354874(-) A-I      intronic chr10:15259702(-) A-I      intronic chr10:15269533(-) A-I      intronic chr10:15368886(-) A-I      intronic chr10:15361344(-) A-I      intronic chr10:15301989(-) A-I      intronic chr10:15306253(-) A-I      intronic chr10:15261245(-) A-I      intronic chr10:15307492(-) A-I      intronic chr10:15260936(-) A-I      intronic chr10:15276970(-) A-I      intronic chr10:15350720(-) A-I      intronic chr10:15284713(-) A-I      intronic chr10:15373376(-) A-I      intronic chr10:15260915(-) A-I      intronic chr10:15301896(-) A-I      intronic chr10:15259777(-) A-I      intronic chr10:15302008(-) A-I      intronic chr10:15306368(-) A-I      intronic chr10:15260873(-) A-I      intronic chr10:15288800(-) A-I      intronic chr10:15261169(-) A-I      intronic chr10:15371543(-) A-I      intronic chr10:15290018(-) A-I      intronic chr10:15285874(-) A-I      intronic chr10:15385273(-) A-I      intronic chr10:15310875(-) A-I      intronic chr10:15308672(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM171A1	chr10:15253659-15253660(-) m6A 3'UTR       24981863 chr10:15254049-15254050(-) m6A 3'UTR       - chr10:15254097-15254098(-) m6A 3'UTR       - chr10:15254496-15254497(-) m6A 3'UTR       24209618//24981863//26404942//27773535//22608085 chr10:15254558-15254559(-) m6A 3'UTR       24209618//25456834//24981863//26404942//27773535//22608085 chr10:15254567-15254568(-) m6A 3'UTR       24209618//25456834//24981863//26404942//27773535//22608085 chr10:15254626-15254627(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:15254636-15254637(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:15254659-15254660(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:15254902-15254903(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15254974-15254975(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15255071-15255072(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15255157-15255158(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15255179-15255180(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15255201-15255202(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15255244-15255245(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr10:15255292-15255293(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr10:15255342-15255343(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr10:15255364-15255365(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr10:15255423-15255424(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr10:15255541-15255542(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22608085 chr10:15255747-15255748(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr10:15255808-15255809(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr10:15255819-15255820(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr10:15255936-15255937(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr10:15255981-15255982(-) m6A CDS       24284625//24981863//27773535//22608085 chr10:15255988-15255989(-) m6A CDS       24284625//24981863//27773535//22608085 chr10:15255999-15256000(-) m6A CDS       24284625//24981863//27773535//22608085 chr10:15256035-15256036(-) m6A CDS       24981863//27773535//22608085 chr10:15256050-15256051(-) m6A CDS       24981863//27773535//22608085 chr10:15256081-15256082(-) m6A CDS       24981863//27773535//22608085 chr10:15256121-15256122(-) Y CDS       26075521 chr10:15256219-15256220(-) m6A CDS//exon       24981863 chr10:15256360-15256361(-) m6A CDS//exon       24209618//25456834//24981863//22608085 chr10:15256410-15256411(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr10:15256525-15256526(-) m6A CDS//exon       24981863//27773535 chr10:15256545-15256546(-) m6A CDS//exon       24981863//27773535 chr10:15256563-15256564(-) m6A CDS//exon       27773535 chr10:15256584-15256585(-) m6A CDS//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	FAM171A1	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: FAM171A1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg