Detail Information

Basic Information:


  VIRBase ID:  

VHID00168241

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:           MPEG1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H7-5p MPEG1
miRBase
Accession/Entrez ID
MIMAT0014351 219972
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - IMD77//Mpg-1//MPG1//MPS1//P-2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MPEG1
chr11:58977551-58977552(-) m6A 3'UTR       -
chr11:58977562-58977563(-) m6A 3'UTR       -
chr11:58977579-58977580(-) m6A 3'UTR       -
chr11:58977640-58977641(-) m6A 3'UTR       -
chr11:58977667-58977668(-) m6A 3'UTR       -
chr11:58977721-58977722(-) m6A 3'UTR       -
chr11:58977768-58977769(-) m6A 3'UTR       -
chr11:58977798-58977799(-) m6A 3'UTR       -
chr11:58977883-58977884(-) m6A 3'UTR       -
chr11:58977892-58977893(-) m6A 3'UTR       28052920
chr11:58977973-58977974(-) m6A 3'UTR       28052920
chr11:58977997-58977998(-) m6A 3'UTR       28052920
chr11:58978006-58978007(-) m6A 3'UTR       28052920
chr11:58978224-58978225(-) m6A CDS       -
chr11:58978436-58978437(-) m6A CDS       28052920
chr11:58978459-58978460(-) m6A CDS       28052920
chr11:58978467-58978468(-) m6A CDS       28052920
chr11:58978725-58978726(-) m6A CDS       -
chr11:58978788-58978789(-) m6A CDS       -
chr11:58978812-58978813(-) m6A CDS       -
chr11:58978823-58978824(-) m6A CDS       -
chr11:58978872-58978873(-) m6A CDS       -
chr11:58978910-58978911(-) m6A CDS       -
chr11:58978917-58978918(-) m6A CDS       -
chr11:58978999-58979000(-) m6A CDS       -
chr11:58979332-58979333(-) m6A CDS       -
chr11:58979341-58979342(-) m6A CDS       -
chr11:58979527-58979528(-) m6A CDS       -
chr11:58979532-58979533(-) m6A CDS       -
chr11:58979574-58979575(-) m6A CDS       -
chr11:58979592-58979593(-) m6A CDS       -
chr11:58979601-58979602(-) m6A CDS       -
chr11:58979615-58979616(-) m6A CDS       -
chr11:58979655-58979656(-) m6A CDS       -
chr11:58979682-58979683(-) m6A CDS       -
chr11:58979753-58979754(-) m6A CDS       -
chr11:58979787-58979788(-) m6A CDS       -
chr11:58979816-58979817(-) m6A CDS       -
chr11:58979926-58979927(-) m6A CDS       -
chr11:58979984-58979985(-) m6A CDS       -
chr11:58980048-58980049(-) m6A CDS       28052920//27371828
chr11:58980068-58980069(-) m6A CDS       28052920//27371828
chr11:58980110-58980111(-) m6A CDS       28052920//27371828
chr11:58980124-58980125(-) m6A CDS       28052920//27371828
chr11:58980165-58980166(-) m6A CDS       28052920//27371828
chr11:58980183-58980184(-) m6A CDS       28052920//27371828
chr11:58980221-58980222(-) m6A CDS       27371828
chr11:58980333-58980334(-) m6A CDS       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H7-5p
Exosome K562 cells     24460325
MPEG1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H7-5p
Interactor2: MPEG1

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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