Basic Information:

  VIRBase ID:  

VHID00168227

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          ANKS6:  NM_173551     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	ANKS6
miRBase Accession/Entrez ID	MIMAT0014351	203286
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANKRD14//NPHP16//PKDR1//SAMD6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ANKS6	chr9:101555918(-) A-I      intronic chr9:101555985(-) A-I      intronic chr9:101555986(-) A-I      intronic chr9:101555987(-) A-I      intronic chr9:101555995(-) A-I      intronic chr9:101555996(-) A-I      intronic chr9:101555992(-) A-I      intronic chr9:101556020(-) A-I      intronic chr9:101555994(-) A-I      intronic chr9:101555993(-) A-I      intronic chr9:101501658(-) A-I      intronic chr9:101545257(-) A-I      intronic chr9:101556204(-) A-I      intronic chr9:101545225(-) A-I      intronic chr9:101545198(-) A-I      intronic chr9:101543276(-) A-I      intronic chr9:101555875(-) A-I      intronic chr9:101545108(-) A-I      intronic chr9:101555860(-) A-I      intronic chr9:101555990(-) A-I      intronic chr9:101556266(-) A-I      intronic chr9:101555876(-) A-I      intronic chr9:101556189(-) A-I      intronic chr9:101556240(-) A-I      intronic chr9:101545311(-) A-I      intronic chr9:101556269(-) A-I      intronic chr9:101555941(-) A-I      intronic chr9:101556229(-) A-I      intronic chr9:101556177(-) A-I      intronic chr9:101556320(-) A-I      intronic chr9:101556275(-) A-I      intronic chr9:101545247(-) A-I      intronic chr9:101555908(-) A-I      intronic chr9:101545327(-) A-I      intronic chr9:101548601(-) A-I      intronic chr9:101556190(-) A-I      intronic chr9:101548711(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ANKS6	chr9:101494333-101494334(-) m6A 3'UTR//exon       22608085 chr9:101494479-101494480(-) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr9:101494537-101494538(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr9:101494560-101494561(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr9:101494598-101494599(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr9:101494663-101494664(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr9:101494678-101494679(-) Y 3'UTR       26075521 chr9:101494725-101494726(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr9:101494805-101494806(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr9:101495365-101495366(-) m6A 3'UTR//intron       24981863//22608085 chr9:101495387-101495388(-) m6A 3'UTR//intron       24981863//22608085 chr9:101495407-101495408(-) m6A 3'UTR//intron       24981863//22608085 chr9:101495865-101495866(-) m6A 3'UTR//intron       24981863//22608085 chr9:101495896-101495897(-) m6A 3'UTR//intron       24981863//22608085 chr9:101495911-101495912(-) m6A 3'UTR//intron       24981863//22608085 chr9:101495965-101495966(-) m6A 3'UTR//intron       24981863 chr9:101496491-101496492(-) m6A 3'UTR//intron       24981863 chr9:101496519-101496520(-) m6A 3'UTR//intron       24981863 chr9:101496535-101496536(-) m6A 3'UTR//intron       24981863 chr9:101496540-101496541(-) m6A 3'UTR//intron       24981863 chr9:101496568-101496569(-) m6A 3'UTR//intron       24981863 chr9:101496587-101496588(-) m6A 3'UTR//intron       24981863 chr9:101496597-101496598(-) m6A 3'UTR//intron       24981863 chr9:101496644-101496645(-) m6A 3'UTR//intron       - chr9:101498233-101498234(-) m6A 3'UTR//intron       24981863 chr9:101498538-101498539(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr9:101498608-101498609(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr9:101498624-101498625(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr9:101498685-101498686(-) Y 3'UTR//intron       26075521 chr9:101498755-101498756(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr9:101498877-101498878(-) m6A CDS//exon       24284625//27773535 chr9:101498893-101498894(-) m6A CDS//exon       24284625//27773535 chr9:101507855-101507856(-) m6A CDS//exon       24284625//27773535 chr9:101507896-101507897(-) m6A CDS//exon       24284625//27773535 chr9:101507952-101507953(-) m6A CDS//exon       24284625//27773535 chr9:101513316-101513317(-) m6A CDS//exon       24284625//27773535 chr9:101518851-101518852(-) m6A CDS//exon       27773536 chr9:101518875-101518876(-) m6A CDS//exon       27773536 chr9:101536217-101536218(-) m6A CDS//exon       24284625 chr9:101536228-101536229(-) m6A CDS//exon       24284625 chr9:101536335-101536336(-) m6A CDS//exon       27773535 chr9:101539705-101539706(-) m6A CDS//exon       27773535 chr9:101540512-101540513(-) m6A CDS//exon       27773535 chr9:101546000-101546001(-) m6A exon//intron       22608085 chr9:101546122-101546123(-) m6A exon//intron       24284625//27773535//27371828//22608085 chr9:101546130-101546131(-) m6A exon//intron       24284625//27773535//27371828//22608085 chr9:101546196-101546197(-) m6A exon//intron       24284625//25456834//27371828//22608085 chr9:101546279-101546280(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr9:101546387-101546388(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr9:101546402-101546403(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr9:101546435-101546436(-) m6A CDS//exon       24284625//24209618//25456834//27371828//22608085 chr9:101546685-101546686(-) m6A exon//intron       24284625//25456834//22608085 chr9:101546730-101546731(-) m6A exon//intron       24284625//25456834//24981863//22608085 chr9:101546736-101546737(-) m6A exon//intron       24284625//25456834//24981863//22608085 chr9:101552260-101552261(-) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr9:101552269-101552270(-) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr9:101552290-101552291(-) m6A exon//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr9:101552299-101552300(-) m6A exon//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr9:101552350-101552351(-) m6A exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552388-101552389(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552414-101552415(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552423-101552424(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552432-101552433(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552447-101552448(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552469-101552470(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552580-101552581(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552600-101552601(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552675-101552676(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr9:101552735-101552736(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr9:101552825-101552826(-) m6A CDS//exon//intron       24284625//25456834//22608085 chr9:101558487-101558488(-) Y CDS//exon//intron       26075521 chr9:101558500-101558501(-) m6A CDS//exon//intron       24284625//24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	ANKS6	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: ANKS6

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg