Detail Information

Basic Information:


  VIRBase ID:  

VHID00168215

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:           SPRED2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H7-5p SPRED2
miRBase
Accession/Entrez ID		 MIMAT0014351 200734
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - Spred-2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SPRED2
chr2:65612385(-) A-I      intronic
chr2:65552895(-) A-I      intronic
chr2:65572510(-) A-I      intronic
chr2:65546009(-) A-I      intronic
chr2:65546001(-) A-I      intronic
chr2:65546000(-) A-I      intronic
chr2:65642151(-) A-I      intronic
chr2:65619523(-) A-I      intronic
chr2:65619503(-) A-I      intronic
chr2:65619469(-) A-I      intronic
chr2:65572564(-) A-I      intronic
chr2:65572559(-) A-I      intronic
chr2:65553059(-) A-I      intronic
chr2:65644113(-) A-I      intronic
chr2:65572555(-) A-I      intronic
chr2:65572532(-) A-I      intronic
chr2:65572523(-) A-I      intronic
chr2:65642155(-) A-I      intronic
chr2:65572516(-) A-I      intronic
chr2:65654370(-) A-I      intronic
chr2:65645883(-) A-I      intronic
chr2:65651032(-) A-I      intronic
chr2:65615038(-) A-I      intronic
chr2:65651678(-) A-I      intronic
chr2:65645826(-) A-I      intronic
chr2:65645722(-) A-I      intronic
chr2:65642194(-) A-I      intronic
chr2:65642193(-) A-I      intronic
chr2:65642187(-) A-I      intronic
chr2:65635946(-) A-I      intronic
chr2:65635914(-) A-I      intronic
chr2:65617963(-) A-I      intronic
chr2:65630554(-) A-I      intronic
chr2:65549566(-) A-I      intronic
chr2:65595981(-) A-I      intronic
chr2:65590252(-) A-I      intronic
chr2:65589876(-) A-I      intronic
chr2:65589605(-) A-I      intronic
chr2:65589601(-) A-I      intronic
chr2:65589600(-) A-I      intronic
chr2:65589515(-) A-I      intronic
chr2:65586874(-) A-I      intronic
chr2:65555035(-) A-I      intronic
chr2:65554973(-) A-I      intronic
chr2:65554954(-) A-I      intronic
chr2:65618014(-) A-I      intronic
chr2:65619411(-) A-I      intronic
chr2:65626264(-) A-I      intronic
chr2:65626593(-) A-I      intronic
chr2:65626677(-) A-I      intronic
chr2:65626757(-) A-I      intronic
chr2:65628211(-) A-I      intronic
chr2:65628213(-) A-I      intronic
chr2:65628268(-) A-I      intronic
chr2:65630505(-) A-I      intronic
chr2:65630532(-) A-I      intronic
chr2:65554947(-) A-I      intronic
chr2:65554930(-) A-I      intronic
chr2:65554918(-) A-I      intronic
chr2:65554268(-) A-I      intronic
chr2:65549708(-) A-I      intronic
chr2:65549568(-) A-I      intronic
chr2:65546031(-) A-I      intronic
chr2:65546028(-) A-I      intronic
chr2:65545978(-) A-I      intronic
chr2:65544585(-) A-I      intronic
chr2:65544564(-) A-I      intronic
chr2:65544561(-) A-I      intronic
chr2:65544481(-) A-I      intronic
chr2:65544464(-) A-I      intronic
chr2:65542957(-) A-I      intronic
chr2:65542931(-) A-I      intronic
chr2:65630546(-) A-I      intronic
chr2:65615064(-) A-I      intronic
chr2:65645726(-) A-I      intronic
chr2:65626589(-) A-I      intronic
chr2:65626356(-) A-I      intronic
chr2:65654357(-) A-I      intronic
chr2:65545858(-) A-I      intronic
chr2:65619457(-) A-I      intronic
chr2:65631094(-) A-I      intronic
chr2:65545834(-) A-I      intronic
chr2:65604121(-) A-I      intronic
chr2:65629361(-) A-I      intronic
chr2:65631082(-) A-I      intronic
chr2:65626223(-) A-I      intronic
chr2:65651874(-) A-I      intronic
chr2:65571202(-) A-I      intronic
chr2:65645862(-) A-I      intronic
chr2:65545954(-) A-I      intronic
chr2:65580030(-) A-I      intronic
chr2:65626804(-) A-I      intronic
chr2:65654281(-) A-I      intronic
chr2:65620577(-) A-I      intronic
chr2:65620568(-) A-I      intronic
chr2:65613337(-) A-I      intronic
chr2:65626720(-) A-I      intronic
chr2:65630660(-) A-I      intronic
chr2:65555129(-) A-I      intronic
chr2:65651195(-) A-I      intronic
chr2:65564204(-) A-I      intronic
chr2:65637830(-) A-I      intronic
chr2:65645867(-) A-I      intronic
chr2:65553095(-) A-I      intronic
chr2:65572535(-) A-I      intronic
chr2:65544523(-) A-I      intronic
chr2:65620696(-) A-I      intronic
chr2:65651196(-) A-I      intronic
chr2:65635969(-) A-I      intronic
chr2:65626309(-) A-I      intronic
chr2:65637887(-) A-I      intronic
chr2:65542967(-) A-I      intronic
chr2:65635823(-) A-I      intronic
chr2:65651974(-) A-I      intronic
chr2:65651923(-) A-I      intronic
chr2:65626721(-) A-I      intronic
chr2:65630499(-) A-I      intronic
chr2:65654416(-) A-I      intronic
chr2:65654373(-) A-I      intronic
chr2:65545840(-) A-I      intronic
chr2:65626364(-) A-I      intronic
chr2:65545895(-) A-I      intronic
chr2:65626787(-) A-I      intronic
chr2:65620562(-) A-I      intronic
chr2:65579931(-) A-I      intronic
chr2:65554955(-) A-I      intronic
chr2:65619536(-) A-I      intronic
chr2:65575780(-) A-I      intronic
chr2:65586973(-) A-I      intronic
chr2:65589671(-) A-I      intronic
chr2:65550402(-) A-I      intronic
chr2:65548576(-) A-I      intronic
chr2:65542964(-) A-I      intronic
chr2:65620550(-) A-I      intronic
chr2:65620616(-) A-I      intronic
chr2:65542885(-) A-I      intronic
chr2:65620744(-) A-I      intronic
chr2:65545905(-) A-I      intronic
chr2:65618078(-) A-I      intronic
chr2:65599075(-) A-I      intronic
chr2:65550261(-) A-I      intronic
chr2:65628399(-) A-I      intronic
chr2:65554269(-) A-I      intronic
chr2:65631326(-) A-I      intronic
chr2:65552818(-) A-I      intronic
chr2:65631095(-) A-I      intronic
chr2:65628226(-) A-I      intronic
chr2:65548588(-) A-I      intronic
chr2:65613303(-) A-I      intronic
chr2:65619477(-) A-I      intronic
chr2:65651035(-) A-I      intronic
chr2:65620687(-) A-I      intronic
chr2:65564130(-) A-I      intronic
chr2:65555128(-) A-I      intronic
chr2:65635977(-) A-I      intronic
chr2:65651867(-) A-I      intronic
chr2:65552886(-) A-I      intronic
chr2:65619528(-) A-I      intronic
chr2:65639019(-) A-I      intronic
chr2:65571195(-) A-I      intronic
chr2:65589810(-) A-I      intronic
chr2:65619473(-) A-I      intronic
chr2:65618016(-) A-I      intronic
chr2:65542869(-) A-I      intronic
chr2:65589568(-) A-I      intronic
chr2:65654391(-) A-I      intronic
chr2:65620571(-) A-I      intronic
chr2:65584071(-) A-I      intronic
chr2:65654344(-) A-I      intronic
chr2:65604120(-) A-I      intronic
chr2:65579926(-) A-I      intronic
chr2:65554058(-) A-I      intronic
chr2:65651062(-) A-I      intronic
chr2:65619542(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SPRED2
chr2:65620562(-) A-I intron -    15342557
chr2:65620568(-) A-I intron -    15342557
chr2:65620571(-) A-I intron -    15342557
chr2:65620577(-) A-I intron -    15342557
chr2:65620616(-) A-I intron -    15342557
chr2:65620622(-) A-I intron -    15342557
chr2:65620633(-) A-I intron -    15342557
chr2:65620682(-) A-I intron -    15342557
chr2:65620687(-) A-I intron -    15342557
chr2:65620696(-) A-I intron -    15342557
chr2:65620744(-) A-I intron -    15342557
chr2:65620748(-) A-I intron -    15342557
chr2:65621188(-) A-I intron -    15342557
chr2:65651874(-) A-I intron -    15342557
chr2:65651923(-) A-I intron -    15342557
chr2:65651974(-) A-I intron -    15342557
chr2:65654281(-) A-I intron -    15342557
chr2:65654344(-) A-I intron -    15342557
chr2:65654357(-) A-I intron -    15342557
chr2:65654373(-) A-I intron -    15342557
chr2:65654374(-) A-I intron -    15342557
chr2:65654391(-) A-I intron -    15342557
chr2:65654416(-) A-I intron -    15342557
chr2:65654478(-) A-I intron -    15342557
chr2:65654683(-) A-I intron -    15342557
chr2:65613303(-) A-G intron -    22484847
chr2:65613337(-) A-G intron -    22484847
chr2:65626223(-) A-G intron -    22484847
chr2:65626309(-) A-G intron -    22484847
chr2:65626356(-) A-G intron -    22484847
chr2:65626364(-) A-G intron -    22484847
chr2:65626720(-) A-G intron -    22484847
chr2:65626787(-) A-G intron -    22484847
chr2:65626804(-) A-G intron -    22484847
chr2:65629361(-) A-G intron -    22484847
chr2:65630499(-) A-G intron -    22484847
chr2:65631326(-) A-G intron -    22484847
chr2:65651026(-) G-A intron -    22484847
chr2:65651035(-) A-G intron -    22484847
chr2:65651062(-) A-G intron -    22484847
chr2:65651075(-) A-G intron -    22484847
chr2:65651195(-) A-G intron -    22484847
chr2:65651196(-) A-G intron -    22484847
chr2:65651661(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SPRED2
chr2:65538273-65538274(-) m6A 3'UTR       27773535
chr2:65538369-65538370(-) m6A 3'UTR       27773535
chr2:65538411-65538412(-) m6A 3'UTR       -
chr2:65538423-65538424(-) m6A 3'UTR       -
chr2:65538624-65538625(-) m6A 3'UTR       27773535
chr2:65538715-65538716(-) m6A 3'UTR       27773535
chr2:65539015-65539016(-) m6A 3'UTR       24284625//25456834//24981863
chr2:65539037-65539038(-) m6A 3'UTR       25456834//24981863
chr2:65539089-65539090(-) m6A 3'UTR       25456834//24981863
chr2:65539922-65539923(-) m6A 3'UTR       24981863//27773535
chr2:65539939-65539940(-) m6A 3'UTR       24209618//24981863//27773535
chr2:65540057-65540058(-) m6A 3'UTR       27773535
chr2:65540071-65540072(-) m6A 3'UTR       27773535
chr2:65540134-65540135(-) m6A 3'UTR       24284625//24209618//27773535
chr2:65540212-65540213(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr2:65540263-65540264(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr2:65540372-65540373(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr2:65540385-65540386(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr2:65540463-65540464(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:65540590-65540591(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:65540803-65540804(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:65540812-65540813(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:65540824-65540825(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:65540851-65540852(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr2:65540888-65540889(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr2:65540929-65540930(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr2:65540950-65540951(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr2:65541055-65541056(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:65541073-65541074(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:65541082-65541083(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:65541148-65541149(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:65541166-65541167(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:65543886-65543887(-) m6A CDS//exon//intron       24284625//24981863//27773535
chr2:65543962-65543963(-) m6A CDS//exon//intron       24981863//27773535
chr2:65544006-65544007(-) m6A CDS//exon//intron       27773535
chr2:65559399-65559400(-) m6A 3'UTR//intron       27773535
chr2:65571559-65571560(-) m6A 3'UTR//intron       27773535
chr2:65571713-65571714(-) m6A CDS//intron       24981863//27773535
chr2:65571859-65571860(-) m6A CDS//exon       24981863//27773535
chr2:65593858-65593859(-) m6A exon//intron       24981863
chr2:65604858-65604859(-) m6A 5'UTR//intron       24981863//27371828
chr2:65604878-65604879(-) m6A 5'UTR//intron       24981863//27371828
chr2:65659108-65659109(-) m6A CDS       24981863//27773535//27371828
chr2:65659128-65659129(-) m6A 5'UTR       24981863//27773535//27371828
chr2:65659144-65659145(-) m6A 5'UTR       24981863//27773535//27371828
chr2:65659181-65659182(-) m6A 5'UTR       24981863//27773535//27371828
chr2:65659293-65659294(-) m6A 5'UTR//intron       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H7-5p
Exosome K562 cells     24460325
SPRED2
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H7-5p
Interactor2: SPRED2

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...