Detail Information

Basic Information:


  VIRBase ID:  

VHID00168198

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:           NUDT10:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H7-5p NUDT10
miRBase
Accession/Entrez ID
MIMAT0014351 170685
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - APS2//DIPP3-alpha//DIPP3a

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NUDT10
chrX:51078059(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NUDT10
chrX:51075828-51075829(+) m6A CDS       24209618//25456834//24981863
chrX:51075838-51075839(+) m6A CDS       24209618//25456834//24981863
chrX:51075844-51075845(+) m6A CDS       24209618//25456834
chrX:51075944-51075945(+) m6A CDS       24209618//25456834//24981863
chrX:51076068-51076069(+) m6A CDS       24209618//25456834//24981863//22608085
chrX:51076073-51076074(+) m6A CDS       24209618//25456834//24981863//22608085
chrX:51076079-51076080(+) m6A CDS       24209618//25456834//24981863//22608085
chrX:51076242-51076243(+) m6A CDS       22608085
chrX:51076274-51076275(+) m6A CDS       22608085
chrX:51079196-51079197(+) m6A 3'UTR       24209618//22608085
chrX:51079220-51079221(+) m6A 3'UTR       24209618//22608085
chrX:51079858-51079859(+) m6A 3'UTR       22608085
chrX:51079899-51079900(+) m6A 3'UTR       24981863//22608085
chrX:51079909-51079910(+) m6A 3'UTR       24981863//22608085
chrX:51079917-51079918(+) m6A 3'UTR       24981863//22608085
chrX:51079973-51079974(+) m6A 3'UTR       24981863//22608085
chrX:51079991-51079992(+) m6A 3'UTR       24981863//22608085
chrX:51080000-51080001(+) m6A 3'UTR       24981863//22608085
chrX:51080051-51080052(+) m6A 3'UTR       24981863//22608085
chrX:51080076-51080077(+) m6A 3'UTR       24981863//22608085
chrX:51080094-51080095(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H7-5p
Exosome K562 cells     24460325
NUDT10
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H7-5p
Interactor2: NUDT10

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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