Basic Information:

  VIRBase ID:  

VHID00168132

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          SYT6:  NM_001366223     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	SYT6
miRBase Accession/Entrez ID	MIMAT0014351	148281
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	sytVI

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SYT6	chr1:114672415(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SYT6	chr1:114662550(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SYT6	chr1:114634075-114634076(-) m6A 3'UTR       25456834 chr1:114634103-114634104(-) m6A 3'UTR       25456834 chr1:114634114-114634115(-) m6A 3'UTR       25456834 chr1:114634120-114634121(-) m6A 3'UTR       25456834 chr1:114634219-114634220(-) m6A 3'UTR       25456834//24981863 chr1:114634604-114634605(-) m6A 3'UTR       24981863 chr1:114634650-114634651(-) m6A 3'UTR       24981863 chr1:114680297-114680298(-) m6A 3'UTR//CDS       25456834//24981863 chr1:114680315-114680316(-) m6A 3'UTR//CDS       25456834//24981863 chr1:114680322-114680323(-) m6A 3'UTR//CDS       25456834//24981863 chr1:114680340-114680341(-) m6A 3'UTR//CDS       25456834//24981863 chr1:114680408-114680409(-) m6A 3'UTR//CDS       25456834//24981863//27773536 chr1:114680454-114680455(-) m6A 3'UTR//CDS       25456834//27773536 chr1:114680460-114680461(-) m6A 3'UTR//CDS       25456834//27773536 chr1:114695541-114695542(-) m6A 5'UTR//intron       25456834 chr1:114695547-114695548(-) m6A 5'UTR//intron       25456834 chr1:114696288-114696289(-) m6A 5'UTR//CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	SYT6	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome HeLa cells     24205503 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: SYT6

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg