Basic Information:

  VIRBase ID:  

VHID00168046

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          LRRC25:  NM_145256     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	LRRC25
miRBase Accession/Entrez ID	MIMAT0014351	126364
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MAPA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LRRC25	chr19:18503110(-) A-I      intronic chr19:18503067(-) A-I      intronic chr19:18503076(-) A-I      intronic chr19:18503085(-) A-I      intronic chr19:18503072(-) A-I      intronic chr19:18503119(-) A-I      intronic chr19:18505344(-) A-I      intronic chr19:18505296(-) A-I      intronic chr19:18505295(-) A-I      intronic chr19:18504189(-) A-I      intronic chr19:18505281(-) A-I      intronic chr19:18505273(-) A-I      intronic chr19:18504190(-) A-I      intronic chr19:18504203(-) A-I      intronic chr19:18505228(-) A-I      intronic chr19:18503129(-) A-I      intronic chr19:18503240(-) A-I      intronic chr19:18503258(-) A-I      intronic chr19:18506781(-) A-I      intronic chr19:18503296(-) A-I      intronic chr19:18506762(-) A-I      intronic chr19:18506734(-) A-I      intronic chr19:18506616(-) A-I      intronic chr19:18506599(-) A-I      intronic chr19:18506069(-) A-I      intronic chr19:18505789(-) A-I      intronic chr19:18505644(-) A-I      intronic chr19:18505643(-) A-I      intronic chr19:18505365(-) A-I      intronic chr19:18505254(-) A-I      intronic chr19:18506150(-) A-I      intronic chr19:18505255(-) A-I      intronic chr19:18504368(-) A-I      intronic chr19:18505504(-) A-I      intronic chr19:18505290(-) A-I      intronic chr19:18505387(-) A-I      intronic chr19:18503242(-) A-I      intronic chr19:18505660(-) A-I      intronic chr19:18505227(-) A-I      intronic chr19:18505749(-) A-I      intronic chr19:18505653(-) A-I      intronic chr19:18503057(-) A-I      intronic chr19:18505925(-) A-I      intronic chr19:18503705(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRRC25	chr19:18502917-18502918(-) m6A CDS       27371828 chr19:18506999-18507000(-) m6A CDS       27371828 chr19:18507042-18507043(-) m6A CDS       27371828 chr19:18507168-18507169(-) m6A CDS       28052920//27371828 chr19:18507206-18507207(-) m6A CDS       27371828 chr19:18507239-18507240(-) m6A CDS       27371828 chr19:18507351-18507352(-) m6A CDS       27371828 chr19:18507387-18507388(-) m6A CDS       27371828 chr19:18507675-18507676(-) m6A CDS       27371828 chr19:18507707-18507708(-) m6A CDS       27371828 chr19:18507717-18507718(-) m6A CDS       27371828 chr19:18507851-18507852(-) m6A 5'UTR//intron       27371828 chr19:18507911-18507912(-) m6A 5'UTR//intron       27371828 chr19:18507946-18507947(-) m6A 5'UTR//intron       27371828 chr19:18508039-18508040(-) m6A 5'UTR//intron       27371828 chr19:18508166-18508167(-) m6A 5'UTR//intron       27371828 chr19:18508202-18508203(-) m6A 5'UTR//intron       27371828 chr19:18508212-18508213(-) m6A 5'UTR//intron       27371828 chr19:18508217-18508218(-) m6A 5'UTR//intron       27371828 chr19:18508224-18508225(-) m6A 5'UTR//intron       27371828 chr19:18508242-18508243(-) m6A 5'UTR//intron       27371828 chr19:18508256-18508257(-) m6A 5'UTR//intron       27371828 chr19:18508270-18508271(-) m6A 5'UTR       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	LRRC25	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: LRRC25

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg