Basic Information:

  VIRBase ID:  

VHID00167986

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          TEX261:  NM_144582     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	TEX261
miRBase Accession/Entrez ID	MIMAT0014351	113419
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	TEG-261

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TEX261	chr2:71219710(-) A-I      intronic chr2:71219740(-) A-I      intronic chr2:71219747(-) A-I      intronic chr2:71219759(-) A-I      intronic chr2:71219422(-) A-I      intronic chr2:71219386(-) A-I      intronic chr2:71219601(-) A-I      intronic chr2:71219421(-) A-I      intronic chr2:71219365(-) A-I      intronic chr2:71219615(-) A-I      intronic chr2:71219512(-) A-I      intronic chr2:71219703(-) A-I      intronic chr2:71219378(-) A-I      intronic chr2:71219447(-) A-I      intronic chr2:71219311(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TEX261	chr2:71219364(-) A-G intron -    22484847 chr2:71219378(-) A-G intron -    22484847 chr2:71219703(-) A-G intron -    22484847 chr2:71219840(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TEX261	chr2:71213292-71213293(-) m6A 3'UTR//exon       - chr2:71213740-71213741(-) m6A 3'UTR//exon       27773535 chr2:71213747-71213748(-) m6A 3'UTR//exon       27773535 chr2:71213798-71213799(-) m6A 3'UTR//exon       27773535 chr2:71213843-71213844(-) m6A 3'UTR//exon       27773535 chr2:71213874-71213875(-) m6A 3'UTR//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325
	TEX261	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: TEX261

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg