Basic Information:

  VIRBase ID:  

VHID00167613

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-5p:  MIMAT0014351          CACHD1:  NM_020925     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H7-5p	CACHD1
miRBase Accession/Entrez ID	MIMAT0014351	57685
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CACHD1	chr1:64988157(+) A-I      intronic chr1:64988132(+) A-I      intronic chr1:65151410(+) A-I      intronic chr1:65151400(+) A-I      intronic chr1:65027487(+) A-I      intronic chr1:64988165(+) A-I      intronic chr1:65027466(+) A-I      intronic chr1:65151362(+) A-I      intronic chr1:65151374(+) A-I      intronic chr1:64988176(+) A-I      intronic chr1:64988171(+) A-I      intronic chr1:64988130(+) A-I      intronic chr1:65151430(+) A-I      intronic chr1:64988174(+) A-I      intronic chr1:65027521(+) A-I      intronic chr1:65151378(+) A-I      intronic chr1:64966327(+) A-I      intronic chr1:64969824(+) A-I      intronic chr1:64969845(+) A-I      intronic chr1:65027496(+) A-I      intronic chr1:65091048(+) A-I      intronic chr1:65091235(+) A-I      intronic chr1:65091242(+) A-I      intronic chr1:65150570(+) A-I      intronic chr1:65150573(+) A-I      intronic chr1:65091189(+) A-I      intronic chr1:65150579(+) A-I      intronic chr1:65129072(+) A-I      intronic chr1:65106344(+) A-I      intronic chr1:65018246(+) A-I      intronic chr1:65151462(+) A-I      intronic chr1:65151540(+) A-I      intronic chr1:65027480(+) A-I      intronic chr1:65100523(+) A-I      intronic chr1:65054203(+) A-I      intronic chr1:65100141(+) A-I      intronic chr1:65018304(+) A-I      intronic chr1:65100344(+) A-I      intronic chr1:65100528(+) A-I      intronic chr1:65091190(+) A-I      intronic chr1:65151583(+) A-I      intronic chr1:65092382(+) A-I      intronic chr1:65018298(+) A-I      intronic chr1:65108546(+) A-I      intronic chr1:65100118(+) A-I      intronic chr1:65089005(+) A-I      intronic chr1:65092856(+) A-I      intronic chr1:65100500(+) A-I      intronic chr1:65100288(+) A-I      intronic chr1:65129073(+) A-I      intronic chr1:65092381(+) A-I      intronic chr1:65131444(+) A-I      intronic chr1:64977886(+) A-I      intronic chr1:65100179(+) A-I      intronic chr1:65133811(+) A-I      intronic chr1:64977930(+) A-I      intronic chr1:65129069(+) A-I      intronic chr1:65021233(+) A-I      intronic chr1:65131022(+) A-I      intronic chr1:65089006(+) A-I      intronic chr1:65100333(+) A-I      intronic chr1:65091055(+) A-I      intronic chr1:65092851(+) A-I      intronic chr1:65113998(+) A-I      intronic chr1:65018286(+) A-I      intronic chr1:65131544(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CACHD1	chr1:65117954-65117955(+) m6A CDS//exon       - chr1:65124539-65124540(+) m6A CDS//exon       - chr1:65129445-65129446(+) m6A CDS//exon       - chr1:65147006-65147007(+) m6A CDS//exon       - chr1:65147773-65147774(+) m6A CDS//exon       24284625 chr1:65157032-65157033(+) m6A CDS//exon       24284625 chr1:65157089-65157090(+) m6A CDS//exon       24284625//24981863 chr1:65157101-65157102(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr1:65157107-65157108(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr1:65157127-65157128(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr1:65157309-65157310(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157320-65157321(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157334-65157335(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157411-65157412(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157480-65157481(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157521-65157522(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157529-65157530(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157542-65157543(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157637-65157638(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157729-65157730(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157800-65157801(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157808-65157809(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157818-65157819(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65157840-65157841(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:65158009-65158010(+) m6A 3'UTR//exon       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H7-5p	Exosome K562 cells     24460325

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H7-5p
Interactor2: CACHD1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg